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Gene Symbol:
Slc6a9
Gene Name:
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
Gene Aliases:
GLYT-1, GLYT-1b, Glyt1
Chromosome Location:
Chr.5: 136669674 - 136703702 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01416529_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Slc6a9
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053818.2 NP_446270.1 5 - 6 774 91
XM_006238625.2 XP_006238687.1 4 - 5 780 91
GenBank mRNA BC128732.1 - 5 - 6 774 8364347 91
L13600.1 - 4 - 5 671 91
M88595.1 - 4 - 5 662 91
M95413.1 - 5 - 6 725 91

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001304.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Transporter Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc6a9

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Function(s) Process(es)

amino acid transmembrane transport
neurotransmitter transport
glycine transport
cation transmembrane transport
L-alpha-amino acid transmembrane transport
sodium:amino acid symporter activity
neurotransmitter:sodium symporter activity
protein binding
glycine transmembrane transporter activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P059525 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P034551 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 286272 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 718473 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 642204 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 844372 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 146113 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 193411 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 164945 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 405732 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 105668 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 73078 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 702189 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 810216 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 262128 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 833869 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 825670 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 118406 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 220901 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 347473 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 23791 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 173671 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 12352 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 941873 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 239948 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 398159 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 351749 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 127212 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 91294 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 37547 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 178267 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 26673 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059525 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P034551 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P059525 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P034551 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P059525 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P034551 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P393273 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700254979 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 13907 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 58155 - -
Agilent Rat cDNA Microarray (G4105A) 700254979 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10871461 - -
Affymetrix Rat Gene 1.0 ST Array 10871452 - -
Affymetrix Rat Gene 1.0 ST Array 10871463 - -
Affymetrix Rat Gene 1.0 ST Array 10871462 - -
Affymetrix Rat Gene 1.0 ST Array 10871458 - -
Affymetrix Rat Gene 1.0 ST Array 10871454 - -
Affymetrix Rat Gene 1.0 ST Array 10871456 - -
Affymetrix Rat Gene 1.0 ST Array 10871445 - -
Affymetrix Rat Gene 1.0 ST Array 10871457 - -
Affymetrix Rat Gene 1.0 ST Array 10871450 - -
Affymetrix Rat Gene 1.0 ST Array 10871455 - -
Affymetrix Rat Gene 1.0 ST Array 10871460 - -
Affymetrix Rat Gene 1.0 ST Array 10871451 - -
Affymetrix Rat Gene 1.0 ST Array 10871459 - -
Affymetrix Rat Gene 1.0 ST Array 10871453 - -
Affymetrix Rat Gene 1.0 ST Array 10871446 - -
Affymetrix Rat Gene 1.1 ST Array 10871444 - -
Rat Genome 230 2.0 Array 1373787_at - -
Rat Genome 230 2.0 Array 1387693_PM_a_at - -
Rat Genome 230 2.0 Array 1369772_PM_at - -
Rat Genome 230 2.0 Array 1373787_PM_at - -
Rat Genome 230 2.0 Array 1387693_a_at - -
Rat Genome 230 2.0 Array 1369772_at - -
Affymetrix HT Rat Focus Array 1373787_PM_at - -
Affymetrix HT Rat Focus Array 1373787_at - -
Affymetrix HT Rat Focus Array 1369772_PM_at - -
Affymetrix HT Rat Focus Array 1387693_a_at - -
Affymetrix HT Rat Focus Array 1387693_PM_a_at - -
Affymetrix HT Rat Focus Array 1369772_at - -
Affymetrix Rat Clariom S Assay PSR0500009144.rn.1 TC0500001304.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500009146.rn.1 TC0500001304.rn.1 RTA TC
Rat Expression Set 230 1387693_PM_a_at - -
Rat Expression Set 230 1387693_a_at - -
Rat Expression Set 230 1373787_at - -
Rat Expression Set 230 1369772_PM_at - -
Rat Expression Set 230 1373787_PM_at - -
Rat Expression Set 230 1369772_at - -
Affymetrix Rat Gene 1.0 ST Array 10871444 - -
Rat Genome U34 Set U28975mRNA#2_at - -
Rat Genome U34 Set U28975mRNA#2_g_at - -
Rat Genome U34 Set L13600_at - -
Rat Genome U34 Set rc_AA943735_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21070141 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1357015 - -
RatRef-12 Expression BeadChip ILMN_68859 - -

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