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See other SMARCAL1 GE Assays ›
Gene Symbol:
Smarcal1
Gene Name:
Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
Gene Aliases:
-
Chromosome Location:
Chr.9: 79943757 - 79990230 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn01401163_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
Your Price
Online offer: 200.00
200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smarcal1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001108222.1 NP_001101692.1 9 - 10 1806 55
XM_006245212.2 XP_006245274.1 10 - 11 2218 55
XM_006245213.2 XP_006245275.1 10 - 11 1742 55
XM_008767235.1 XP_008765457.1 10 - 11 1882 55
XM_008767236.1 XP_008765458.1 10 - 11 2106 55
XM_008767237.1 XP_008765459.1 10 - 11 1252 55
GenBank mRNA BC168154.1 - 10 - 11 1820 8362162 55

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000870.rn.1

Set Membership:

Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

DNA strand renaturation
DNA metabolic process
DNA repair
regulation of transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
biological_process
chromatin modification
replication fork processing
molecular_function
DNA binding
helicase activity
ATP binding
DNA-dependent ATPase activity
annealing helicase activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P328815 - -
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P004550 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 152127 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 857120 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 887961 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 261190 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 162960 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 440587 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 120169 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 65759 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 51005 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 146168 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 658083 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 510984 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 576828 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 764130 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 388931 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 79569 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 503336 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 385706 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 248363 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 793125 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 121511 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 802860 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 759160 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 108696 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 38014 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 715275 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 295949 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 360600 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 478257 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 338224 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 226150 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 728662 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 192806 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 737510 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 578380 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 408865 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 112752 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 172419 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 62137 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 37073 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 180428 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P328815 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P004550 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P004550 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P328815 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P328815 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P004550 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P328815 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 89146 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10924212 - -
Affymetrix Rat Gene 1.0 ST Array 10924203 - -
Affymetrix Rat Gene 1.0 ST Array 10924209 - -
Affymetrix Rat Gene 1.0 ST Array 10924204 - -
Affymetrix Rat Gene 1.0 ST Array 10924215 - -
Affymetrix Rat Gene 1.0 ST Array 10924202 - -
Affymetrix Rat Gene 1.0 ST Array 10924207 - -
Affymetrix Rat Gene 1.0 ST Array 10924200 - -
Affymetrix Rat Gene 1.0 ST Array 10924211 - -
Affymetrix Rat Gene 1.0 ST Array 10924214 - -
Affymetrix Rat Gene 1.0 ST Array 10924208 - -
Affymetrix Rat Gene 1.0 ST Array 10924201 - -
Affymetrix Rat Gene 1.0 ST Array 10924206 - -
Affymetrix Rat Gene 1.0 ST Array 10924216 - -
Affymetrix Rat Gene 1.0 ST Array 10924210 - -
Affymetrix Rat Gene 1.0 ST Array 10924205 - -
Affymetrix Rat Gene 1.1 ST Array 10924199 - -
Rat Genome 230 2.0 Array 1373706_PM_at - -
Rat Genome 230 2.0 Array 1373706_at - -
Affymetrix HT Rat Focus Array 1373706_at - -
Affymetrix HT Rat Focus Array 1373706_PM_at - -
Affymetrix Rat Clariom S Assay PSR0900007127.rn.1 TC0900000870.rn.1 RTA TC
Rat Expression Set 230 1373706_PM_at - -
Rat Expression Set 230 1373706_at - -
Affymetrix Rat Gene 1.0 ST Array 10924199 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21383703 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1356620 - -

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Host server : magellan-search-5fc94fc45-4mbwj:80/100.66.130.94:80.
git-commit: 7a6627b71d15189168043ee5c63248cc100e5965
git-url: https://github.com/thermofisher/magellan-search
git-branch: release/2.37.0-2025.10.41-1.0