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Gene Symbol:
Sftpa1
Gene Name:
surfactant protein A1
Gene Aliases:
SP-A, Sftp1, Sftpa, Sftpl
Chromosome Location:
Chr.16: 18716019 - 18719404 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00824545_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sftpa1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001270645.1 NP_001257574.1 3 - 4 353 58
NM_001270647.1 NP_001257576.1 3 - 4 564 58
NM_017329.2 NP_059025.2 3 - 4 350 58
GenBank mRNA BC085353.1 - 3 - 4 353 7121530 58
CK364490.1 - 3 - 4 576 58
M15754.1 - 3 - 4 338 58
M33201.1 - 3 - 4 347 58
X13176.1 - 3 - 4 338 58
X13177.1 - 3 - 4 347 58

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600000218.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sftpa1

Panther Classification:

Molecular Function -

surfactant

Gene Ontology Categories:

Function(s) Process(es)

response to hypoxia
respiratory gaseous exchange
circadian rhythm
response to hormone
response to lipopolysaccharide
response to retinoic acid
response to vitamin A
positive regulation of phagocytosis
response to glucocorticoid
response to hyperoxia
response to interleukin-6
response to epidermal growth factor
cellular response to mechanical stimulus
cellular response to nitric oxide
carbohydrate binding
metal ion binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P193130 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 767166 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 20858 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 362876 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P193130 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P193130 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P193130 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P193130 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 15687 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10787101 - -
Affymetrix Rat Gene 1.0 ST Array 10787098 - -
Affymetrix Rat Gene 1.0 ST Array 10787096 - -
Affymetrix Rat Gene 1.0 ST Array 10787102 - -
Affymetrix Rat Gene 1.0 ST Array 10787099 - -
Affymetrix Rat Gene 1.0 ST Array 10787100 - -
Affymetrix Rat Gene 1.1 ST Array 10787095 - -
Rat Genome 230 2.0 Array 1369107_PM_at - -
Rat Genome 230 2.0 Array 1387460_at - -
Rat Genome 230 2.0 Array 1369107_at - -
Rat Genome 230 2.0 Array 1387460_PM_at - -
Affymetrix HT Rat Focus Array 1369107_at - -
Affymetrix HT Rat Focus Array 1369107_PM_at - -
Affymetrix HT Rat Focus Array 1387460_at - -
Affymetrix HT Rat Focus Array 1387460_PM_at - -
Affymetrix Rat Clariom S Assay PSR1600002097.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600002095.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600002092.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600002098.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600002096.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1600002090.rn.1 TC1600000218.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10787095 - -
Rat Genome U34 Set M33201_at - -
Rat Genome U34 Set X13176cds_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21858809 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1356952 - -
RatRef-12 Expression BeadChip ILMN_50861 - -

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