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Gene Symbol:
Tdg
Gene Name:
thymine-DNA glycosylase
Gene Aliases:
-
Chromosome Location:
Chr.7: 27194000 - 27213676 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00821513_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tdg
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053729.1 NP_446181.1 7 - 8 833 80
GenBank mRNA AY026945.1 - 7 - 8 833 80
BC129088.1 - 7 - 8 850 8362408 80

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002400.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdg

Panther Classification:

Molecular Function -

DNA metabolism protein DNA glycosylase nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
base-excision repair
mismatch repair
transcription from RNA polymerase II promoter
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
RNA polymerase II transcription cofactor activity
double-stranded DNA binding
protein kinase C binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0700019001.rn.1 TC0700002400.rn.1 RTA TC

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