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Gene Symbol:
Slc12a1
Gene Name:
solute carrier family 12 (sodium/potassium/chloride transporter), member 1
Gene Aliases:
Nkcc2
Chromosome Location:
Chr.3: 117421530 - 117498372 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00692576_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Slc12a1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001270617.1 NP_001257546.1 3 - 4 757 63
NM_001270618.1 NP_001257547.1 3 - 4 757 63
NR_073053.1 3 - 4 799 63
XM_008762140.1 XP_008760362.1 3 - 4 829 63
XM_008762141.1 XP_008760363.1 3 - 4 828 63
XM_008762142.1 XP_008760364.1 3 - 4 829 63
XM_008762143.1 XP_008760365.1 3 - 4 829 63
XM_008762144.1 XP_008760366.1 3 - 4 829 63
GenBank mRNA BC087017.1 - 3 - 4 799 7109809 63
EF577032.1 - 2 - 3 741 63
FM059245.1 - 2 - 3 389 63
JN579708.1 - 3 - 4 757 63
U10096.1 - 3 - 4 757 63

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300001623.rn.1

Set Membership:

Amplicon length less than or equal to 70 Transporter Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Function(s) Process(es)

kidney development
potassium ion transport
sodium ion transport
chloride transport
excretion
diterpenoid metabolic process
protein insertion into membrane from inner side
ion transmembrane transport
renal rubidium ion absorption
chemical homeostasis
renal sodium ion absorption
cation transmembrane transport
chloride transmembrane transport
sodium:potassium:chloride symporter activity
cation:chloride symporter activity
rubidium ion transmembrane transporter activity

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P007973 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 370620 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 850575 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 556365 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 866103 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 334573 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 511919 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 550248 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 339511 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 118339 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 455605 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 695497 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 237235 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 790512 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 523630 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 166827 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 342509 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 118886 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 633956 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 885583 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 252130 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 153851 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 273316 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 432054 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 640271 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 4932 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 202777 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 521437 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 151397 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 913213 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 411236 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 539205 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 768690 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 839155 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 578292 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 730633 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 647448 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 402881 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 830744 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 344215 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 166106 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 200694 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 264445 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 752508 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 142735 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 811038 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 161941 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 59513 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 350049 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 19416 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 415339 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 540959 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 615018 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 631290 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 919169 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 145858 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 405945 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 27094 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 73069 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 180634 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 85028 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 134188 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 115744 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 149002 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 90204 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 105013 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 102776 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 164182 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P007973 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P007973 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P007973 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P471442 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701827585 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 31852 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 14460 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 85126 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 89615 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 11879 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 84129 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 15054 - -
Agilent Rat cDNA Microarray (G4105A) 701827585 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10839376 - -
Affymetrix Rat Gene 1.0 ST Array 10839385 - -
Affymetrix Rat Gene 1.0 ST Array 10839381 - -
Affymetrix Rat Gene 1.0 ST Array 10839378 - -
Affymetrix Rat Gene 1.0 ST Array 10839386 - -
Affymetrix Rat Gene 1.0 ST Array 10839368 - -
Affymetrix Rat Gene 1.0 ST Array 10839391 - -
Affymetrix Rat Gene 1.0 ST Array 10839382 - -
Affymetrix Rat Gene 1.0 ST Array 10839377 - -
Affymetrix Rat Gene 1.0 ST Array 10839397 - -
Affymetrix Rat Gene 1.0 ST Array 10839396 - -
Affymetrix Rat Gene 1.0 ST Array 10839372 - -
Affymetrix Rat Gene 1.0 ST Array 10839392 - -
Affymetrix Rat Gene 1.0 ST Array 10839393 - -
Affymetrix Rat Gene 1.0 ST Array 10839389 - -
Affymetrix Rat Gene 1.0 ST Array 10839379 - -
Affymetrix Rat Gene 1.0 ST Array 10839384 - -
Affymetrix Rat Gene 1.0 ST Array 10839370 - -
Affymetrix Rat Gene 1.0 ST Array 10839395 - -
Affymetrix Rat Gene 1.0 ST Array 10839371 - -
Affymetrix Rat Gene 1.0 ST Array 10839380 - -
Affymetrix Rat Gene 1.0 ST Array 10839390 - -
Affymetrix Rat Gene 1.0 ST Array 10839369 - -
Affymetrix Rat Gene 1.0 ST Array 10839394 - -
Affymetrix Rat Gene 1.0 ST Array 10839383 - -
Affymetrix Rat Gene 1.0 ST Array 10839398 - -
Affymetrix Rat Gene 1.0 ST Array 10839387 - -
Affymetrix Rat Gene 1.0 ST Array 10839399 - -
Affymetrix Rat Gene 1.0 ST Array 10839374 - -
Affymetrix Rat Gene 1.1 ST Array 10839367 - -
Rat Genome 230 2.0 Array 1368548_at - -
Rat Genome 230 2.0 Array 1368548_PM_at - -
Affymetrix HT Rat Focus Array 1368548_at - -
Affymetrix HT Rat Focus Array 1368548_PM_at - -
Affymetrix Rat Clariom S Assay PSR0300011360.rn.1 TC0300001623.rn.1 RTA TC
Rat Expression Set 230 1368548_PM_at - -
Rat Expression Set 230 1368548_at - -
Affymetrix Rat Gene 1.0 ST Array 10839367 - -
Rat Genome U34 Set U10096_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1376627 - -

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