Ppargc1b
Genomic Map
Back To TopAssay Details
| Gene Symbol: Ppargc1b | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_176075.2 | NP_788264.1 | 402 | 54 | ||
| GenBank mRNA | AY188951.1 | - | 402 | 54 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1800001515.rn.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Recommended Assay
Rattus norvegicus
Rat Estrogen Panel
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
ossification
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
transcription from mitochondrial promoter
actin filament organization
positive regulation of alkaline phosphatase activity
intracellular estrogen receptor signaling pathway
cellular response to reactive oxygen species
positive regulation of phosphorylation
positive regulation of osteoclast differentiation
positive regulation of bone resorption
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
response to glucocorticoid
response to cAMP
bone trabecula formation
positive regulation of receptor activity
nucleotide binding
RNA polymerase II transcription cofactor activity
molecular_function
nucleic acid binding
RNA binding
transcription factor binding
estrogen receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
receptor activator activity
AF-2 domain binding
ossification
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
transcription from mitochondrial promoter
actin filament organization
positive regulation of alkaline phosphatase activity
intracellular estrogen receptor signaling pathway
cellular response to reactive oxygen species
positive regulation of phosphorylation
positive regulation of osteoclast differentiation
positive regulation of bone resorption
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
response to glucocorticoid
response to cAMP
bone trabecula formation
positive regulation of receptor activity
nucleotide binding
RNA polymerase II transcription cofactor activity
molecular_function
nucleic acid binding
RNA binding
transcription factor binding
estrogen receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
receptor activator activity
AF-2 domain binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P116300 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 862326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 191816 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 691519 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 770514 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 231867 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 962901 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256788 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 230300 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584217 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 736217 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 8897 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 318551 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 303929 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 720237 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 503096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850231 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 851011 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 170741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 542910 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 834227 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583904 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 226243 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 127359 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328346 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 859734 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 42712 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 389814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 95827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 566661 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 295014 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 617802 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815223 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 839030 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 718324 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 197189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 515330 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 782512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 577766 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 313344 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 609443 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 932687 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 418382 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 563108 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 297022 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 783481 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 969591 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 691700 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 170326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745773 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 751552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 598637 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 377389 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 132966 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 24406 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 693894 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 472160 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390789 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 767212 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 193429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 567587 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 853445 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 217795 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 264874 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 687943 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745353 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835830 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 742660 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 400751 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 118327 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 752732 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 520559 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 611817 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 367908 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 100626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 87775 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 121228 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 105651 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 111555 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 50783 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 122454 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 156203 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 73760 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148496 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P116300 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P116300 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P116300 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P116300 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 10474 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 103472 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 70633 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 99028 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 59581 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 30677 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31225 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 21976 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45510 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 69684 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 29114 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10804688 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804685 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804682 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804681 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804680 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804687 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804689 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804684 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804683 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804679 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804686 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10804678 | - | - |
| Rat Genome 230 2.0 Array | 1392715_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1392715_at | - | - |
| Affymetrix HT Rat Focus Array | 1392715_at | - | - |
| Affymetrix HT Rat Focus Array | 1392715_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1800010740.rn.1 | TC1800001515.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1800010741.rn.1 | TC1800001515.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1800010742.rn.1 | TC1800001515.rn.1 | RTA TC |
| Rat Expression Set 230 | 1392715_at | - | - |
| Rat Expression Set 230 | 1392715_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10804678 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22069433 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1370999 | - | - |
| RatRef-12 Expression BeadChip | ILMN_48665 | - | - |
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