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See other APOE GE Assays ›
Gene Symbol:
Apoe
Gene Name:
apolipoprotein E
Gene Aliases:
APOEA
Chromosome Location:
Chr.1: 80612894 - 80616820 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00593680_m1
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Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apoe
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001270681.1 NP_001257610.1 3 - 4 349 99
NM_001270682.1 NP_001257611.1 3 - 4 328 99
NM_001270683.1 NP_001257612.1 3 - 4 315 99
NM_001270684.1 NP_001257613.1 3 - 4 291 99
NM_138828.3 NP_620183.2 3 - 4 309 99
GenBank mRNA BC060313.1 - 3 - 4 282 6919048 99
BC086581.1 - 3 - 4 252 7307758 99
FQ209421.1 - 3 - 4 99
FQ209426.1 - 3 - 4 280 99
FQ209457.1 - 3 - 4 277 99
FQ209625.1 - 3 - 4 278 99
FQ209879.1 - 2 - 3 225 99
FQ209926.1 - 3 - 4 278 99
FQ210262.1 - 3 - 4 278 99
FQ210410.1 - 3 - 4 278 99
FQ211250.1 - 3 - 4 279 99
FQ212760.1 - 3 - 4 278 99
FQ212769.1 - 3 - 4 278 99
FQ213060.1 - 3 - 4 274 99
FQ213396.1 - 3 - 4 274 99
FQ213533.1 - 3 - 4 281 99
FQ213898.1 - 3 - 4 270 99
FQ214072.1 - 3 - 4 278 99
FQ214282.1 - 3 - 4 278 99
FQ218386.1 - 3 - 4 277 99
FQ218473.1 - 3 - 4 307 99
FQ218485.1 - 3 - 4 278 99
FQ218540.1 - 3 - 4 278 99
FQ218699.1 - 3 - 4 280 99
FQ218898.1 - 3 - 4 280 99
FQ218953.1 - 2 - 3 334 99
FQ219009.1 - 3 - 4 278 99
FQ219124.1 - 2 - 3 238 99
FQ219144.1 - 3 - 4 278 99
FQ219202.1 - 2 - 3 229 99
FQ219319.1 - 3 - 4 278 99
FQ219432.1 - 3 - 4 278 99
FQ219448.1 - 3 - 4 280 99
FQ219490.1 - 3 - 4 278 99
FQ219516.1 - 3 - 4 278 99
FQ219534.1 - 3 - 4 278 99
FQ219700.1 - 3 - 4 278 99
FQ219711.1 - 3 - 4 278 99
FQ220125.1 - 3 - 4 274 99
FQ220532.1 - 3 - 4 274 99
FQ220683.1 - 3 - 4 278 99
FQ220752.1 - 3 - 4 309 99
FQ220879.1 - 3 - 4 282 99
FQ221856.1 - 3 - 4 278 99
FQ229186.1 - 3 - 4 278 99
FQ229530.1 - 2 - 3 229 99
FQ229565.1 - 3 - 4 274 99
FQ229759.1 - 3 - 4 278 99
FQ229950.1 - 3 - 4 278 99
FQ230084.1 - 3 - 4 278 99
FQ231375.1 - 3 - 4 307 99
J00705.1 - 2 - 3 236 99

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100004935.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoe

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of endothelial cell proliferation
response to dietary excess
lipid metabolic process
triglyceride metabolic process
cholesterol biosynthetic process
cholesterol catabolic process
lipid transport
cellular calcium ion homeostasis
receptor-mediated endocytosis
response to oxidative stress
G-protein coupled receptor signaling pathway
nitric oxide mediated signal transduction
aging
protein localization
cholesterol metabolic process
regulation of gene expression
negative regulation of platelet activation
positive regulation of cholesterol esterification
positive regulation of cholesterol efflux
peripheral nervous system axon regeneration
long-chain fatty acid transport
protein import
triglyceride catabolic process
cGMP-mediated signaling
negative regulation of blood coagulation
positive regulation of cGMP biosynthetic process
neuron projection regeneration
axon regeneration
regulation of cholesterol transport
regulation of Cdc42 protein signal transduction
response to retinoic acid
positive regulation of low-density lipoprotein particle receptor catabolic process
response to insulin
cholesterol efflux
phospholipid efflux
very-low-density lipoprotein particle remodeling
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
chylomicron remnant clearance
high-density lipoprotein particle clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
lipoprotein biosynthetic process
lipoprotein catabolic process
vasodilation
cholesterol homeostasis
positive regulation of catalytic activity
negative regulation of MAP kinase activity
negative regulation of neuron apoptotic process
negative regulation of blood vessel endothelial cell migration
reverse cholesterol transport
response to ethanol
negative regulation of cholesterol biosynthetic process
positive regulation of axon extension
positive regulation of lipid biosynthetic process
oligodendrocyte differentiation
artery morphogenesis
negative regulation of inflammatory response
positive regulation of nitric-oxide synthase activity
positive regulation of membrane protein ectodomain proteolysis
negative regulation of lipid biosynthetic process
maintenance of location in cell
lipid homeostasis
fatty acid homeostasis
positive regulation of dendritic spine development
negative regulation of dendritic spine development
cellular response to interleukin-1
cellular response to growth factor stimulus
cellular response to cholesterol
cardiovascular system development
negative regulation of cholesterol efflux
AMPA glutamate receptor clustering
NMDA glutamate receptor clustering
regulation of beta-amyloid clearance
regulation of neuron death
negative regulation of neuron death
positive regulation of neuron death
negative regulation of postsynaptic membrane organization
positive regulation of postsynaptic membrane organization
negative regulation of presynaptic membrane organization
positive regulation of presynaptic membrane organization
positive regulation of beta-amyloid formation
negative regulation of beta-amyloid formation
regulation of tau-protein kinase activity
negative regulation of dendritic spine maintenance
positive regulation of dendritic spine maintenance
positive regulation of phospholipid efflux
positive regulation of neurofibrillary tangle assembly
negative regulation of phospholipid efflux
negative regulation of lipid transport across blood brain barrier
positive regulation of lipid transport across blood brain barrier
beta-amyloid binding
receptor binding
lipid transporter activity
phospholipid binding
heparin binding
lipid binding
cholesterol binding
antioxidant activity
cholesterol transporter activity
identical protein binding
protein homodimerization activity
hydroxyapatite binding
metal chelating activity
tau protein binding
low-density lipoprotein particle receptor binding
phosphatidylcholine-sterol O-acyltransferase activator activity
very-low-density lipoprotein particle receptor binding
lipoprotein particle binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR0100039035.rn.1 TC0100004935.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100039021.rn.1 TC0100004935.rn.1 RTA TC

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