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See other CTSD GE Assays ›
Gene Symbol:
Ctsd
Gene Name:
cathepsin D
Gene Aliases:
-
Chromosome Location:
Chr.1: 215541570 - 215553446 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00592528_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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Online offer: 200.00
200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ctsd
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_134334.2 NP_599161.2 5 - 6 798 82
GenBank mRNA BC062032.1 - 5 - 6 798 5623627 82
FQ228180.1 - 1 - 2 137 82
FQ232703.1 - 1 - 2 137 82
X54467.1 - 5 - 6 743 82

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006975.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Protease Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsd

Gene Ontology Categories:

Function(s) Process(es)

autophagosome assembly
proteolysis
autophagy
epithelial tube branching involved in lung morphogenesis
endopeptidase activity
aspartic-type endopeptidase activity
peptidase activity
peptide binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P13241 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 646631 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 929539 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 604773 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 544053 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 19480 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 611170 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 79342 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 753343 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 76818 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 808533 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 101307 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 130474 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P13241 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P13241 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P13241 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P13241 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700542409 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 29572 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 85107 - -
Agilent Rat cDNA Microarray (G4105A) 700542409 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10726985 - -
Affymetrix Rat Gene 1.0 ST Array 10726984 - -
Affymetrix Rat Gene 1.0 ST Array 10726983 - -
Affymetrix Rat Gene 1.0 ST Array 10726987 - -
Affymetrix Rat Gene 1.0 ST Array 10726988 - -
Affymetrix Rat Gene 1.0 ST Array 10726980 - -
Affymetrix Rat Gene 1.0 ST Array 10726986 - -
Affymetrix Rat Gene 1.0 ST Array 10726982 - -
Affymetrix Rat Gene 1.0 ST Array 10726981 - -
Affymetrix Rat Gene 1.1 ST Array 10726979 - -
Rat Genome 230 2.0 Array 1367651_PM_at - -
Rat Genome 230 2.0 Array 1367651_at - -
Affymetrix HT Rat Focus Array 1367651_PM_at - -
Affymetrix HT Rat Focus Array 1367651_at - -
Affymetrix Rat Clariom S Assay PSR0100055144.rn.1 TC0100006975.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0100055145.rn.1 TC0100006975.rn.1 RTA TC
Rat Expression Set 230 1367651_PM_at - -
Rat Expression Set 230 1367651_at - -
Affymetrix Rat Gene 1.0 ST Array 10726979 - -
Rat Genome U34 Set X54467_at - -
Rat Genome U34 Set rc_AI235585_s_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20896744 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1358267 - -
RatRef-12 Expression BeadChip ILMN_54586 - -

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