Rph3al
Genomic Map
Back To TopAssay Details
| Gene Symbol: Rph3al | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_133591.2 | NP_598275.1 | 3 - 4 | 340 | 79 | |
| XM_008767941.1 | XP_008766163.1 | 3 - 4 | 701 | 79 | ||
| XM_008767942.1 | XP_008766164.1 | 3 - 4 | 766 | 79 | ||
| XM_008767943.1 | XP_008766165.1 | 3 - 4 | 701 | 79 | ||
| XM_008767944.1 | XP_008766166.1 | 3 - 4 | 701 | 79 | ||
| GenBank mRNA | AF022774.1 | - | 2 - 3 | 266 | 79 | |
| BC091126.1 | - | 3 - 4 | 340 | 7380477 | 79 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1000003290.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
intracellular protein transport
exocytosis
regulation of calcium ion-dependent exocytosis
response to drug
glucose homeostasis
negative regulation of G-protein coupled receptor protein signaling pathway
positive regulation of protein secretion
protein binding
Rab GTPase binding
LIM domain binding
metal ion binding
intracellular protein transport
exocytosis
regulation of calcium ion-dependent exocytosis
response to drug
glucose homeostasis
negative regulation of G-protein coupled receptor protein signaling pathway
positive regulation of protein secretion
protein binding
Rab GTPase binding
LIM domain binding
metal ion binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P120604 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_42_P486964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 716092 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 894837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 765863 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 548704 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 785070 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 695789 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 814123 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 970268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 933456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478468 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 408399 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 710490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 73279 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 799319 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 941083 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 422657 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 440778 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 763143 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 335539 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556663 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 557305 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 48111 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 257321 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 769890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232726 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 430140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 812738 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 169956 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 562994 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 551302 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466669 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 503406 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 234323 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 399956 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 137699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109718 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 162932 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 517893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 747011 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 301476 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 891768 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 445071 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 643341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 176761 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 321360 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 14174 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 132543 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 119281 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 50069 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466843 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874531 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478675 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 594168 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 654552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 706042 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 698180 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 651118 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 146697 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823151 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 832645 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 512483 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 689372 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 543300 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 441974 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 312122 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 97041 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 41629 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77406 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 113405 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 76484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 13980 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 72953 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 121138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 122168 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 51552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 80140 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P486964 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P120604 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P120604 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P486964 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P120604 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_42_P486964 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_42_P486964 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 701508912 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68046 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 18845 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 20917 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 67649 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62093 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700501084 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701508912 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10744985 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744993 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744984 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744991 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744992 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744986 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744989 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744994 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744987 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744990 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744988 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10744983 | - | - |
| Rat Genome 230 2.0 Array | 1387176_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387176_at | - | - |
| Affymetrix HT Rat Focus Array | 1387176_at | - | - |
| Affymetrix HT Rat Focus Array | 1387176_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1000029393.rn.1 | TC1000003290.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387176_PM_at | - | - |
| Rat Expression Set 230 | 1387176_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10744983 | - | - |
| Rat Genome U34 Set | AF022774_at | - | - |
| Rat Genome U34 Set | AF022774_g_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21374825 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1365776 | - | - |
| RatRef-12 Expression BeadChip | ILMN_59274 | - | - |
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