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See other DKC1 GE Assays ›
Gene Symbol:
Dkc1
Gene Name:
dyskeratosis congenita 1, dyskerin
Gene Aliases:
Nap57
Chromosome Location:
Chr.X: 155844914 - 155862764 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00591537_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Dkc1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_133419.1 NP_596910.1 9 - 10 1011 53
XM_008773596.1 XP_008771818.1 9 - 10 1457 53
GenBank mRNA BC087600.1 - 9 - 10 970 53
BC099832.1 - 9 - 10 969 7934021 53
Z34922.1 - 9 - 10 1011 53

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00002624.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dkc1

Panther Classification:

Molecular Function -

centromere DNA-binding protein chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

pseudouridine synthesis
RNA-dependent DNA biosynthetic process
rRNA processing
RNA processing
cell proliferation
rRNA pseudouridine synthesis
positive regulation of telomere maintenance via telomerase
box H/ACA snoRNA metabolic process
positive regulation of telomerase activity
telomerase activity
RNA binding
protein binding
pseudouridine synthase activity
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1035733 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1035733 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1035733 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1035733 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1035733 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700143485 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700501762 - -
Agilent Rat cDNA Microarray (G4105A) 700143485 - -
Agilent Rat cDNA Microarray (G4105A) 700501762 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10940563 - -
Affymetrix Rat Gene 1.1 ST Array 10940563 - -
Rat Genome 230 2.0 Array 1368649_PM_at - -
Rat Genome 230 2.0 Array 1368649_at - -
Affymetrix HT Rat Focus Array 1368649_PM_at - -
Affymetrix HT Rat Focus Array 1368649_at - -
Affymetrix Rat Clariom S Assay PSR0X00016182.rn.1 TC0X00002624.rn.1 RTA TC
Rat Expression Set 230 1368649_PM_at - -
Rat Expression Set 230 1368649_at - -
Affymetrix Rat Gene 1.0 ST Array 10940563 - -
Rat Genome U34 Set rc_AA892562_g_at - -
Rat Genome U34 Set rc_AA892562_at - -
Rat Genome U34 Set rc_AA851968_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21756338 - -

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