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Gene Symbol:
Khdrbs1
Gene Name:
KH domain containing, RNA binding, signal transduction associated 1
Gene Aliases:
P62, Sam68
Chromosome Location:
Chr.5: 147927145 - 147953093 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00590279_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Khdrbs1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_130405.1 NP_569089.1 1 - 2 464 128
GenBank mRNA AF305619.1 - 1 - 2 464 128
AF393783.1 - 1 - 2 381 128
BC061987.1 - 1 - 2 488 5599491 128

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003686.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Khdrbs1

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Function(s) Process(es)

G2/M transition of mitotic cell cycle
transcription, DNA-templated
cell surface receptor signaling pathway
regulation of signal transduction
positive regulation of signal transduction
regulation of protein stability
negative regulation of transcription, DNA-templated
positive regulation of translational initiation
regulation of RNA export from nucleus
positive regulation of RNA export from nucleus
RNA binding
SH3/SH2 adaptor activity
protein binding
poly(A) binding
poly(U) RNA binding
SH3 domain binding
protein complex binding
identical protein binding
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P13106 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 633123 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 289825 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 875598 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 360827 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 116933 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 596658 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 294893 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 880605 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 806135 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 104978 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 661534 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 477179 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 910138 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 702450 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 164312 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 93174 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 112121 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P13106 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P13106 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P13106 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P200507 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P13106 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 97038 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 14169 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 88817 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10880061 - -
Affymetrix Rat Gene 1.0 ST Array 10880059 - -
Affymetrix Rat Gene 1.0 ST Array 10880060 - -
Affymetrix Rat Gene 1.0 ST Array 10880062 - -
Affymetrix Rat Gene 1.0 ST Array 10880058 - -
Affymetrix Rat Gene 1.0 ST Array 10880063 - -
Affymetrix Rat Gene 1.0 ST Array 10880057 - -
Affymetrix Rat Gene 1.1 ST Array 10880056 - -
Rat Genome 230 2.0 Array 1386896_at - -
Rat Genome 230 2.0 Array 1386896_PM_at - -
Rat Genome 230 2.0 Array 1398773_at - -
Rat Genome 230 2.0 Array 1398773_PM_at - -
Affymetrix HT Rat Focus Array 1398773_at - -
Affymetrix HT Rat Focus Array 1398773_PM_at - -
Affymetrix HT Rat Focus Array 1386896_PM_at - -
Affymetrix HT Rat Focus Array 1386896_at - -
Affymetrix Rat Clariom S Assay PSR0500027557.rn.1 TC0500003686.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500027555.rn.1 TC0500003686.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0500027556.rn.1 TC0500003686.rn.1 RTA TC
Rat Expression Set 230 1386896_PM_at - -
Rat Expression Set 230 1398773_at - -
Rat Expression Set 230 1398773_PM_at - -
Rat Expression Set 230 1386896_at - -
Affymetrix Rat Gene 1.0 ST Array 10880056 - -
Rat Genome U34 Set rc_AA894160_at - -
Rat Genome U34 Set rc_AI044977_at - -
Rat Genome U34 Set rc_AA818199_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20730174 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1362265 - -
RatRef-12 Expression BeadChip ILMN_52682 - -

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