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Gene Symbol:
Cdkn1a
Gene Name:
cyclin-dependent kinase inhibitor 1A
Gene Aliases:
Cip1, UV96, Waf1
Chromosome Location:
Chr.20: 6348422 - 6358864 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00589996_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cdkn1a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_080782.3 NP_542960.1 2 - 3 483 65
XM_006256128.2 XP_006256190.1 2 - 3 547 65
GenBank mRNA BC100620.1 - 2 - 3 483 7938247 65
U24174.1 - 2 - 3 526 65

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000249.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Endogenous Controls Detect Genomic DNA Recommended Assay Rattus norvegicus Rat Endogenous Controls Inventoried Rat_Endogenous_Controls Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cdkn1a

Panther Classification:

Molecular Function -

kinase inhibitor

Gene Ontology Categories:

Function(s) Process(es)

regulation of cyclin-dependent protein serine/threonine kinase activity
G1/S transition of mitotic cell cycle
G2/M transition of mitotic cell cycle
protein phosphorylation
cellular response to DNA damage stimulus
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
cell cycle arrest
Ras protein signal transduction
regulation of mitotic cell cycle
negative regulation of cell proliferation
response to UV
response to toxic substance
response to organic substance
response to X-ray
response to organonitrogen compound
negative regulation of gene expression
response to organic cyclic compound
negative regulation of cell growth
positive regulation of B cell proliferation
organ regeneration
cellular response to extracellular stimulus
regulation of protein import into nucleus, translocation
cellular response to heat
negative regulation of phosphorylation
response to drug
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
negative regulation of apoptotic process
positive regulation of programmed cell death
negative regulation of cyclin-dependent protein serine/threonine kinase activity
positive regulation of protein kinase activity
response to arsenic-containing substance
positive regulation of fibroblast proliferation
response to glucocorticoid
response to corticosterone
regulation of cell cycle
response to hyperoxia
intestinal epithelial cell maturation
cellular response to ionizing radiation
cellular response to UV-B
mitotic cell cycle arrest
cellular senescence
negative regulation of G1/S transition of mitotic cell cycle
regulation of DNA biosynthetic process
positive regulation of reactive oxygen species metabolic process
cyclin-dependent protein serine/threonine kinase inhibitor activity
protein binding
cyclin-dependent protein kinase activating kinase activity
cyclin binding
ubiquitin protein ligase binding
protein complex binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR2000002443.rn.1 TC2000000249.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000002449.rn.1 TC2000000249.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000002450.rn.1 TC2000000249.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000002453.rn.1 TC2000000249.rn.1 RTA TC

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