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Gene Symbol:
Apoa5
Gene Name:
apolipoprotein A-V
Gene Aliases:
apo-AV, apoA-V
Chromosome Location:
Chr.8: 50559079 - 50561717 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00589738_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apoa5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001277264.1 NP_001264193.1 2 - 3 168 96
NM_080576.2 NP_542143.1 3 - 4 208 96
XM_006242865.2 XP_006242927.1 3 - 4 306 96
GenBank mRNA AF202887.1 - 2 - 3 153 96
AF202888.1 - 2 - 3 153 96
BC089780.1 - 3 - 4 208 7371817 96
FQ210962.1 - 2 - 3 168 96
FQ219463.1 - 2 - 3 168 96

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800000623.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoa5

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Function(s) Process(es)

triglyceride metabolic process
cholesterol biosynthetic process
lipid transport
response to hormone
positive regulation of cholesterol esterification
positive regulation of triglyceride catabolic process
positive regulation of very-low-density lipoprotein particle remodeling
triglyceride catabolic process
regulation of intestinal cholesterol absorption
organ regeneration
neuron projection regeneration
cholesterol efflux
phospholipid efflux
triglyceride-rich lipoprotein particle remodeling
very-low-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
lipoprotein metabolic process
tissue regeneration
cholesterol homeostasis
reverse cholesterol transport
positive regulation of fatty acid biosynthetic process
phosphatidylcholine metabolic process
positive regulation of lipid catabolic process
positive regulation of lipoprotein lipase activity
acylglycerol homeostasis
triglyceride homeostasis
molecular_function
phospholipid binding
enzyme activator activity
heparin binding
lipid binding
cholesterol binding
cholesterol transporter activity
enzyme binding
phosphatidylcholine binding
lipase binding
low-density lipoprotein particle receptor binding
phosphatidylcholine-sterol O-acyltransferase activator activity
lipase activator activity
lipoprotein lipase activator activity
lipoprotein particle receptor binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P700817 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 824982 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 812452 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P700817 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P700817 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P700817 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P700817 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10909728 - -
Affymetrix Rat Gene 1.0 ST Array 10909730 - -
Affymetrix Rat Gene 1.0 ST Array 10909732 - -
Affymetrix Rat Gene 1.0 ST Array 10909731 - -
Affymetrix Rat Gene 1.0 ST Array 10909729 - -
Affymetrix Rat Gene 1.1 ST Array 10909727 - -
Rat Genome 230 2.0 Array 1369011_PM_at - -
Rat Genome 230 2.0 Array 1369011_at - -
Affymetrix HT Rat Focus Array 1369011_at - -
Affymetrix HT Rat Focus Array 1369011_PM_at - -
Affymetrix Rat Clariom S Assay PSR0800004044.rn.1 TC0800000623.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800004046.rn.1 TC0800000623.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800004045.rn.1 TC0800000623.rn.1 RTA TC
Rat Expression Set 230 1369011_PM_at - -
Rat Expression Set 230 1369011_at - -
Affymetrix Rat Gene 1.0 ST Array 10909727 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22025331 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1359395 - -
RatRef-12 Expression BeadChip ILMN_51589 - -

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