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See other S100A9 GE Assays ›
Gene Symbol:
S100a9
Gene Name:
S100 calcium binding protein A9
Gene Aliases:
Mrp14
Chromosome Location:
Chr.2: 190097436 - 190100208 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00585879_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: S100a9
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053587.1 NP_446039.1 1 - 2 185 99
XM_006232780.1 XP_006232842.1 2 - 3 266 99
GenBank mRNA AB118215.1 - 1 - 2 149 99
L18948.1 - 1 - 2 185 99

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004107.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene S100a9

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Function(s) Process(es)

leukocyte migration involved in inflammatory response
chronic inflammatory response
positive regulation of peptide secretion
autophagy
activation of cysteine-type endopeptidase activity involved in apoptotic process
response to zinc ion
neutrophil chemotaxis
leukocyte chemotaxis
actin cytoskeleton reorganization
response to lipopolysaccharide
innate immune response
regulation of integrin biosynthetic process
response to ethanol
positive regulation of inflammatory response
neutrophil aggregation
positive regulation of intrinsic apoptotic signaling pathway
molecular_function
calcium ion binding
microtubule binding
zinc ion binding
antioxidant activity
Toll-like receptor 4 binding
arachidonic acid binding
RAGE receptor binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P353618 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 271563 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 610418 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P353618 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P353618 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P353618 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P353618 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700817842 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 11304 - -
Agilent Rat cDNA Microarray (G4105A) 700817842 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10824697 - -
Affymetrix Rat Gene 1.0 ST Array 10824696 - -
Affymetrix Rat Gene 1.1 ST Array 10824695 - -
Rat Genome 230 2.0 Array 1387125_PM_at - -
Rat Genome 230 2.0 Array 1387125_at - -
Affymetrix HT Rat Focus Array 1387125_at - -
Affymetrix HT Rat Focus Array 1387125_PM_at - -
Affymetrix Rat Clariom S Assay PSR0200028141.rn.1 TC0200004107.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0200028140.rn.1 TC0200004107.rn.1 RTA TC
Rat Expression Set 230 1387125_at - -
Rat Expression Set 230 1387125_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10824695 - -
Rat Genome U34 Set L18948_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21470392 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1361341 - -
RatRef-12 Expression BeadChip ILMN_49657 - -

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