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Gene Symbol:
Hdac3
Gene Name:
histone deacetylase 3
Gene Aliases:
-
Chromosome Location:
Chr.18: 31073057 - 31094347 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00584926_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_053448.1 NP_445900.1 322 58
GenBank mRNA AF321131.1 - 322 58
BC061988.1 - 325 5599517 58

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1800001299.rn.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hdac3

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
positive regulation of protein phosphorylation
transcription, DNA-templated
protein deacetylation
regulation of mitotic cell cycle
negative regulation of myotube differentiation
histone deacetylation
regulation of protein stability
response to nutrient levels
positive regulation of TOR signaling
negative regulation of interleukin-1 production
negative regulation of tumor necrosis factor production
circadian regulation of gene expression
regulation of multicellular organism growth
response to drug
positive regulation of transcription factor import into nucleus
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of neuron apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of JNK cascade
negative regulation of protein export from nucleus
spindle assembly
histone H3-K9 modification
histone H3 deacetylation
histone H4 deacetylation
cellular response to mechanical stimulus
cellular response to parathyroid hormone stimulus
cellular response to fluid shear stress
response to dexamethasone
positive regulation of type B pancreatic cell apoptotic process
negative regulation of cardiac muscle cell differentiation
DNA binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein binding
transcription factor binding
enzyme binding
cyclin binding
chromatin DNA binding
NAD-dependent histone deacetylase activity (H3-K14 specific)
protein deacetylase activity
histone deacetylase binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
GTPase binding
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1800009296.rn.1 TC1800001299.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1800009298.rn.1 TC1800001299.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1800009297.rn.1 TC1800001299.rn.1 RTA TC
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21794596 - -

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