Scarb1
Genomic MapAssay Details
| Gene Symbol: Scarb1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_031541.1 | NP_113729.1 | 3 - 4 | 630 | 75 | |
| GenBank mRNA | AB002151.1 | - | 3 - 4 | 630 | 75 | |
| AF071495.1 | - | 3 - 4 | 437 | 75 | ||
| AY451993.1 | - | 3 - 4 | 535 | 75 | ||
| AY682847.1 | - | 3 - 4 | 535 | 75 | ||
| BC076504.1 | - | 3 - 4 | 539 | 7099863 | 75 | |
| D89655.1 | - | 3 - 4 | 548 | 75 | ||
| U76205.1 | - | 3 - 4 | 476 | 75 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1200000578.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Apoptosis
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
endothelial cell proliferation
steroid biosynthetic process
androgen biosynthetic process
cholesterol catabolic process
lipid transport
receptor-mediated endocytosis
phagocytosis, recognition
cell adhesion
positive regulation of triglyceride biosynthetic process
positive regulation of cholesterol storage
regulation of phosphatidylcholine catabolic process
phospholipid transport
lipopolysaccharide transport
cholesterol transport
lipopolysaccharide-mediated signaling pathway
detection of lipopolysaccharide
cholesterol efflux
high-density lipoprotein particle remodeling
low-density lipoprotein particle clearance
high-density lipoprotein particle clearance
vitamin transmembrane transport
cholesterol homeostasis
blood vessel endothelial cell migration
recognition of apoptotic cell
reverse cholesterol transport
adhesion of symbiont to host
regulation of phagocytosis
positive regulation of nitric-oxide synthase activity
triglyceride homeostasis
cholesterol import
lipopolysaccharide binding
phosphatidylserine binding
lipopolysaccharide receptor activity
lipid transporter activity
high-density lipoprotein particle binding
low-density lipoprotein particle binding
apolipoprotein binding
apolipoprotein A-I binding
protein homodimerization activity
high-density lipoprotein particle receptor activity
endothelial cell proliferation
steroid biosynthetic process
androgen biosynthetic process
cholesterol catabolic process
lipid transport
receptor-mediated endocytosis
phagocytosis, recognition
cell adhesion
positive regulation of triglyceride biosynthetic process
positive regulation of cholesterol storage
regulation of phosphatidylcholine catabolic process
phospholipid transport
lipopolysaccharide transport
cholesterol transport
lipopolysaccharide-mediated signaling pathway
detection of lipopolysaccharide
cholesterol efflux
high-density lipoprotein particle remodeling
low-density lipoprotein particle clearance
high-density lipoprotein particle clearance
vitamin transmembrane transport
cholesterol homeostasis
blood vessel endothelial cell migration
recognition of apoptotic cell
reverse cholesterol transport
adhesion of symbiont to host
regulation of phagocytosis
positive regulation of nitric-oxide synthase activity
triglyceride homeostasis
cholesterol import
lipopolysaccharide binding
phosphatidylserine binding
lipopolysaccharide receptor activity
lipid transporter activity
high-density lipoprotein particle binding
low-density lipoprotein particle binding
apolipoprotein binding
apolipoprotein A-I binding
protein homodimerization activity
high-density lipoprotein particle receptor activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P138776 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P422696 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 627842 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749605 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 734831 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 753317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 955176 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 494217 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 953289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 596156 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 711364 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232159 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 118152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 162837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 521321 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 542206 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248744 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 781142 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 859829 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 316774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328912 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659570 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385386 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 502949 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 182938 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35147 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 218264 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 37696 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 953188 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 567860 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 798934 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780401 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850312 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 806004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 638684 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 607276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 604135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 744813 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 159129 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 31348 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 415930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 207313 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 53940 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944954 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 681846 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 136756 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745026 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 723281 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 807245 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 522614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57626 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 151436 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 49038 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169892 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 83846 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 32054 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 69267 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 48142 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P138776 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P422696 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P138776 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P422696 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P422696 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P138776 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P422696 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P379244 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700697696 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 65504 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 53934 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 89389 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 22668 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 2810 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700697696 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10758138 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758145 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758147 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758149 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758154 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758146 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758150 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758143 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758142 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758152 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758140 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758148 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758151 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758155 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758141 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758139 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758144 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758153 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10758137 | - | - |
| Rat Genome 230 2.0 Array | 1386956_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1367855_at | - | - |
| Rat Genome 230 2.0 Array | 1367855_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1386956_at | - | - |
| Affymetrix HT Rat Focus Array | 1386956_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1367855_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1367855_at | - | - |
| Affymetrix HT Rat Focus Array | 1386956_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1200004867.rn.1 | TC1200000578.rn.1 | RTA TC |
| Rat Expression Set 230 | 1367855_PM_at | - | - |
| Rat Expression Set 230 | 1386956_PM_at | - | - |
| Rat Expression Set 230 | 1367855_at | - | - |
| Rat Expression Set 230 | 1386956_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10758137 | - | - |
| Rat Genome U34 Set | AF071495_s_at | - | - |
| Rat Genome U34 Set | D89655_at | - | - |
| Rat Genome U34 Set | rc_AA874843_s_at | - | - |
| Rat Genome U34 Set | AF071495_s_at | - | - |
| Rat Genome U34 Set | rc_AA874843_s_at | - | - |
| Rat Genome U34 Set | D89655_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21417157 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1359178 | - | - |
| RatRef-12 Expression BeadChip | ILMN_64154 | - | - |
Back To TopCitations (1)
CCAAT/enhancer binding protein beta, but not steroidogenic factor-1, modulates the phthalate-induced dysregulation of rat fetal testicular steroidogenesis.
- Authors
- Kuhl AJ, Ross SM, Gaido KW
- Journal
- Endocrinology - Page No 5851 (Sat Dec 01 00:00:00 UTC 2007)
- Volume (Year)
- 148 (2007)
- Product Usage
- -
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