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Gene Symbol:
Ppargc1a
Gene Name:
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
Gene Aliases:
Ppargc1
Chromosome Location:
Chr.14: 63095291 - 63190688 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00580241_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ppargc1a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_031347.1 NP_112637.1 7 - 8 914 94
XM_008770219.1 XP_008768441.1 7 - 8 981 94
XM_008770220.1 XP_008768442.1 6 - 7 2151 94
GenBank mRNA AB025784.1 - 7 - 8 914 94
AY237127.1 - 7 - 8 873 94

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000656.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus Rat Estrogen Panel Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppargc1a

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Function(s) Process(es)

response to hypoxia
response to dietary excess
galactose metabolic process
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
mitochondrion organization
androgen metabolic process
response to cold
positive regulation of mitochondrion organization
response to organic cyclic compound
response to activity
response to muscle activity
negative regulation of smooth muscle cell migration
respiratory electron transport chain
positive regulation of cellular metabolic process
response to nutrient levels
circadian regulation of gene expression
cellular response to oxidative stress
response to statin
response to drug
response to starvation
regulation of circadian rhythm
response to leucine
negative regulation of neuron apoptotic process
cellular respiration
negative regulation of glycolytic process
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of fatty acid oxidation
positive regulation of smooth muscle cell proliferation
positive regulation of sequence-specific DNA binding transcription factor activity
flavone metabolic process
cellular response to nitrite
cellular response to tumor necrosis factor
cellular response to fatty acid
cellular response to hypoxia
response to epinephrine
response to norepinephrine
cellular response to thyroid hormone stimulus
negative regulation of neuron death
positive regulation of cellular respiration
positive regulation of mitochondrial DNA metabolic process
positive regulation of muscle tissue development
negative regulation of receptor activity
regulation of N-methyl-D-aspartate selective glutamate receptor activity
positive regulation of energy homeostasis
positive regulation of ATP biosynthetic process
nucleotide binding
RNA polymerase II transcription cofactor activity
DNA binding
chromatin binding
transcription coactivator activity
RNA binding
protein binding
transcription factor binding
ligand-dependent nuclear receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
chromatin DNA binding
ubiquitin protein ligase binding
sequence-specific DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1400004639.rn.1 TC1400000656.rn.1 RTA TC

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