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Gene Symbol:
Tfam
Gene Name:
transcription factor A, mitochondrial
Gene Aliases:
Mttfa
Chromosome Location:
Chr.20: 18594057 - 18606106 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00580051_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tfam
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_031326.1 NP_112616.1 2 - 3 327 93
GenBank mRNA AB014089.1 - 2 - 3 327 93
AF246196.1 - 1 - 2 104 93
AF377866.1 - 2 - 3 334 93
AJ312746.1 - 2 - 3 327 93
BC062022.1 - 2 - 3 329 5623491 93

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000508.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tfam

Gene Ontology Categories:

Function(s) Process(es)

mitochondrial DNA replication
chromatin remodeling
regulation of transcription, DNA-templated
transcription from mitochondrial promoter
transcription initiation from mitochondrial promoter
mitochondrial respiratory chain complex assembly
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II core promoter proximal region sequence-specific DNA binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
DNA binding, bending
heat shock protein binding
poly(A) RNA binding
mitochondrial light strand promoter sense binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15316 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 717845 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 157128 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 796926 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 967622 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 571115 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 282653 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 239846 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 411848 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 94383 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 46454 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15316 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15316 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15316 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15316 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 20459 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 33785 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10829710 - -
Affymetrix Rat Gene 1.0 ST Array 10829709 - -
Affymetrix Rat Gene 1.0 ST Array 10829705 - -
Affymetrix Rat Gene 1.0 ST Array 10829704 - -
Affymetrix Rat Gene 1.0 ST Array 10829708 - -
Affymetrix Rat Gene 1.0 ST Array 10829707 - -
Affymetrix Rat Gene 1.0 ST Array 10829706 - -
Affymetrix Rat Gene 1.1 ST Array 10829703 - -
Rat Genome 230 2.0 Array 1367941_at - -
Rat Genome 230 2.0 Array 1367941_PM_at - -
Affymetrix HT Rat Focus Array 1367941_PM_at - -
Affymetrix HT Rat Focus Array 1367941_at - -
Affymetrix Rat Clariom S Assay PSR2000004783.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004777.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004778.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004779.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004781.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004776.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004780.rn.1 TC2000000508.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR2000004782.rn.1 TC2000000508.rn.1 RTA TC
Rat Expression Set 230 1367941_at - -
Rat Expression Set 230 1367941_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10829703 - -
Rat Genome U34 Set rc_AI237711_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22059526 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1365074 - -
RatRef-12 Expression BeadChip ILMN_59173 - -

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