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Gene Symbol:
Psmc5
Gene Name:
proteasome (prosome, macropain) 26S subunit, ATPase, 5
Gene Aliases:
Sug1
Chromosome Location:
Chr.10: 94445877 - 94451811 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00579821_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Psmc5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_031149.1 NP_112411.1 2 - 3 107 80
GenBank mRNA AB000491.1 - 2 - 3 107 80
BC058462.1 - 2 - 3 103 6891005 80
D83521.1 - 2 - 3 125 80
FQ213263.1 - 2 - 3 124 80
FQ213735.1 - 2 - 3 99 80
FQ233831.1 - 2 - 3 110 80

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001787.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psmc5

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Function(s) Process(es)

proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of transcription, DNA-templated
positive regulation of inclusion body assembly
receptor binding
ATP binding
transcription factor binding
ATPase activity
TBP-class protein binding
thyrotropin-releasing hormone receptor binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P12543 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 7266 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 446079 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 229021 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 33904 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 172407 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12543 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12543 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P12543 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12543 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10739139 - -
Affymetrix Rat Gene 1.0 ST Array 10739140 - -
Affymetrix Rat Gene 1.0 ST Array 10739137 - -
Affymetrix Rat Gene 1.0 ST Array 10739146 - -
Affymetrix Rat Gene 1.0 ST Array 10739141 - -
Affymetrix Rat Gene 1.0 ST Array 10739147 - -
Affymetrix Rat Gene 1.0 ST Array 10739138 - -
Affymetrix Rat Gene 1.0 ST Array 10739145 - -
Affymetrix Rat Gene 1.0 ST Array 10739136 - -
Affymetrix Rat Gene 1.0 ST Array 10739143 - -
Affymetrix Rat Gene 1.0 ST Array 10739142 - -
Affymetrix Rat Gene 1.1 ST Array 10739135 - -
Rat Genome 230 2.0 Array 1367833_PM_at - -
Rat Genome 230 2.0 Array 1367833_at - -
Affymetrix HT Rat Focus Array 1367833_at - -
Affymetrix HT Rat Focus Array 1367833_PM_at - -
Affymetrix Rat Clariom S Assay PSR1000016354.rn.1 TC1000001787.rn.1 RTA TC
Rat Expression Set 230 1367833_at - -
Rat Expression Set 230 1367833_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10739135 - -
Rat Genome U34 Set AB000491_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21928539 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1354016 - -
RatRef-12 Expression BeadChip ILMN_67036 - -

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