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See other ALDH6A1 GE Assays ›
Gene Symbol:
Aldh6a1
Gene Name:
aldehyde dehydrogenase 6 family, member A1
Gene Aliases:
Mmsdh
Chromosome Location:
Chr.6: 108146552 - 108167185 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00579182_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Aldh6a1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_031057.2 NP_112319.2 11 - 12 1545 129
XM_006240354.2 XP_006240416.1 11 - 12 1910 129
XM_008764862.1 XP_008763084.1 10 - 11 1449 129
XM_008764863.1 XP_008763085.1 11 - 12 1547 129
GenBank mRNA CK476335.1 - 1 - 2 112 129

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002857.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Aldh6a1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Function(s) Process(es)

thymine catabolic process
valine metabolic process
valine catabolic process
beta-alanine catabolic process
thymine metabolic process
brown fat cell differentiation
oxidation-reduction process
fatty-acyl-CoA binding
aldehyde dehydrogenase (NAD) activity
methylmalonate-semialdehyde dehydrogenase (acylating) activity
thiolester hydrolase activity
malonate-semialdehyde dehydrogenase (acetylating) activity
poly(A) RNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P555261 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 917235 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 550923 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 94171 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 188890 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 360982 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 585773 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 955583 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 897285 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 245173 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 218249 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 900279 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 953150 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 880906 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 124470 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 72180 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P555261 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P555261 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P555261 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P555261 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 75441 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 2046 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 48659 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10891132 - -
Affymetrix Rat Gene 1.0 ST Array 10891130 - -
Affymetrix Rat Gene 1.0 ST Array 10891121 - -
Affymetrix Rat Gene 1.0 ST Array 10891126 - -
Affymetrix Rat Gene 1.0 ST Array 10891129 - -
Affymetrix Rat Gene 1.0 ST Array 10891125 - -
Affymetrix Rat Gene 1.0 ST Array 10891128 - -
Affymetrix Rat Gene 1.0 ST Array 10891131 - -
Affymetrix Rat Gene 1.0 ST Array 10891127 - -
Affymetrix Rat Gene 1.0 ST Array 10891122 - -
Affymetrix Rat Gene 1.0 ST Array 10891123 - -
Affymetrix Rat Gene 1.0 ST Array 10891124 - -
Affymetrix Rat Gene 1.1 ST Array 10891120 - -
Rat Genome 230 2.0 Array 1387344_at - -
Rat Genome 230 2.0 Array 1387344_PM_at - -
Rat Genome 230 2.0 Array 1368814_at - -
Rat Genome 230 2.0 Array 1368814_PM_at - -
Affymetrix HT Rat Focus Array 1368814_PM_at - -
Affymetrix HT Rat Focus Array 1368814_at - -
Affymetrix HT Rat Focus Array 1387344_at - -
Affymetrix HT Rat Focus Array 1387344_PM_at - -
Affymetrix Rat Clariom S Assay PSR0600020137.rn.1 TC0600002857.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0600020135.rn.1 TC0600002857.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0600020136.rn.1 TC0600002857.rn.1 RTA TC
Rat Expression Set 230 1387344_at - -
Rat Expression Set 230 1368814_at - -
Rat Expression Set 230 1387344_PM_at - -
Rat Expression Set 230 1368814_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10891120 - -
Rat Genome U34 Set M93401_at - -
Rat Genome U34 Set rc_AI171803_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 20708753 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1354510 - -
RatRef-12 Expression BeadChip ILMN_53446 - -

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