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Gene Symbol:
Gpd1
Gene Name:
glycerol-3-phosphate dehydrogenase 1 (soluble)
Gene Aliases:
GPDH, Gpd3
Chromosome Location:
Chr.7: 141369490 - 141377931 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00573596_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gpd1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_022215.2 NP_071551.2 7 - 8 961 79
XM_006257376.1 XP_006257438.1 8 - 9 1163 79
GenBank mRNA AB002558.1 - 7 - 8 949 79
BC088396.1 - 7 - 8 961 7108237 79

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001823.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gpd1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Function(s) Process(es)

carbohydrate metabolic process
glycerol-3-phosphate metabolic process
gluconeogenesis
NADH oxidation
glycerophosphate shuttle
NADH metabolic process
positive regulation of glycolytic process
glycerol-3-phosphate catabolic process
glycerolipid metabolic process
oxidation-reduction process
cellular response to cAMP
cellular response to tumor necrosis factor
glycerol-3-phosphate dehydrogenase [NAD+] activity
glycerol-3-phosphate dehydrogenase activity
protein homodimerization activity
NAD binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P480224 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 187024 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 346649 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 83562 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 81628 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P480224 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P480224 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P480224 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12167 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700626043 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 65821 - -
Agilent Rat cDNA Microarray (G4105A) 700626043 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10899189 - -
Affymetrix Rat Gene 1.0 ST Array 10899194 - -
Affymetrix Rat Gene 1.0 ST Array 10899195 - -
Affymetrix Rat Gene 1.0 ST Array 10899190 - -
Affymetrix Rat Gene 1.0 ST Array 10899193 - -
Affymetrix Rat Gene 1.0 ST Array 10899196 - -
Affymetrix Rat Gene 1.0 ST Array 10899191 - -
Affymetrix Rat Gene 1.0 ST Array 10899188 - -
Affymetrix Rat Gene 1.0 ST Array 10899192 - -
Affymetrix Rat Gene 1.1 ST Array 10899187 - -
Rat Genome 230 2.0 Array 1369560_PM_at - -
Rat Genome 230 2.0 Array 1371363_PM_at - -
Rat Genome 230 2.0 Array 1371363_at - -
Rat Genome 230 2.0 Array 1369560_at - -
Affymetrix HT Rat Focus Array 1371363_at - -
Affymetrix HT Rat Focus Array 1371363_PM_at - -
Affymetrix HT Rat Focus Array 1369560_at - -
Affymetrix HT Rat Focus Array 1369560_PM_at - -
Affymetrix Rat Clariom S Assay PSR0700014098.rn.1 TC0700001823.rn.1 RTA TC
Rat Expression Set 230 1371363_PM_at - -
Rat Expression Set 230 1371363_at - -
Rat Expression Set 230 1369560_PM_at - -
Rat Expression Set 230 1369560_at - -
Affymetrix Rat Gene 1.0 ST Array 10899187 - -
Rat Genome U34 Set AB002558_at - -
Rat Genome U34 Set rc_AI232970_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21144175 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1353571 - -
RatRef-12 Expression BeadChip ILMN_53363 - -

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