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See other SCAF1 GE Assays ›
Gene Symbol:
Scaf1
Gene Name:
SR-related CTD-associated factor 1
Gene Aliases:
Sr-a1
Chromosome Location:
Chr.1: 100997724 - 101011563 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00571425_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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Online offer: 200.00
200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Scaf1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_019384.1 NP_062257.1 3 - 4 326 86
XM_008759409.1 XP_008757631.1 6 - 7 1289 86
XM_008759410.1 XP_008757632.1 6 - 7 2366 86
XM_008759411.1 XP_008757633.1 6 - 7 1236 86
GenBank mRNA U49056.1 - 3 - 4 326 86

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005369.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Scaf1

Panther Classification:

Molecular Function -

RNA metabolism protein RNA processing factor RNA splicing factor nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

transcription from RNA polymerase II promoter
mRNA processing
RNA splicing
RNA binding
protein domain specific binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P102326 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 214017 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 224964 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 514974 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 923311 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 265909 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 642845 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 48352 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 35372 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 36079 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 80563 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P102326 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P102326 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P102326 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12049 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701914676 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 702151471 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 99770 - -
Agilent Rat cDNA Microarray (G4105A) 701293128 - -
Agilent Rat cDNA Microarray (G4105A) 702151471 - -
Agilent Rat cDNA Microarray (G4105A) 701914676 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10721607 - -
Affymetrix Rat Gene 1.0 ST Array 10721609 - -
Affymetrix Rat Gene 1.0 ST Array 10721610 - -
Affymetrix Rat Gene 1.0 ST Array 10721614 - -
Affymetrix Rat Gene 1.0 ST Array 10721608 - -
Affymetrix Rat Gene 1.0 ST Array 10721612 - -
Affymetrix Rat Gene 1.0 ST Array 10721613 - -
Affymetrix Rat Gene 1.0 ST Array 10721611 - -
Affymetrix Rat Gene 1.1 ST Array 10721606 - -
Rat Genome 230 2.0 Array 1367984_PM_at - -
Rat Genome 230 2.0 Array 1367984_at - -
Affymetrix HT Rat Focus Array 1367984_at - -
Affymetrix HT Rat Focus Array 1367984_PM_at - -
Affymetrix Rat Clariom S Assay PSR0100043583.rn.1 TC0100005369.rn.1 RTA TC
Rat Expression Set 230 1367984_at - -
Rat Expression Set 230 1367984_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10721606 - -
Rat Genome U34 Set U49056_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21434201 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1351179 - -
RatRef-12 Expression BeadChip ILMN_69734 - -

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