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See other SOX10 GE Assays ›
Gene Symbol:
Sox10
Gene Name:
SRY (sex determining region Y)-box 10
Gene Aliases:
-
Chromosome Location:
Chr.7: 120393254 - 120403523 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00569909_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sox10
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_019193.2 NP_062066.1 4 - 5 1280 114
GenBank mRNA AJ001029.1 - 4 - 5 1281 114
BC062067.1 - 3 - 4 992 5599259 114

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003488.rn.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox10

Gene Ontology Categories:

Function(s) Process(es)

in utero embryonic development
neural crest cell migration
positive regulation of neuroblast proliferation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
peripheral nervous system development
positive regulation of gliogenesis
cell differentiation
melanocyte differentiation
lacrimal gland development
negative regulation of apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
cell development
cell maturation
enteric nervous system development
digestive tract morphogenesis
developmental growth
oligodendrocyte differentiation
stem cell differentiation
morphogenesis of a branching epithelium
negative regulation of canonical Wnt signaling pathway
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription factor binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
identical protein binding
transcription regulatory region DNA binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P447394 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 470503 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 765848 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 491761 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 12805 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 964872 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 270220 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 589233 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 44669 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 234200 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 58250 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P447394 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P447394 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P447394 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P447394 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 701744690 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 31284 - -
Agilent Rat cDNA Microarray (G4105A) 701744690 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10905379 - -
Affymetrix Rat Gene 1.0 ST Array 10905380 - -
Affymetrix Rat Gene 1.0 ST Array 10905383 - -
Affymetrix Rat Gene 1.0 ST Array 10905381 - -
Affymetrix Rat Gene 1.0 ST Array 10905382 - -
Affymetrix Rat Gene 1.1 ST Array 10905378 - -
Rat Genome 230 2.0 Array 1368439_PM_at - -
Rat Genome 230 2.0 Array 1391699_at - -
Rat Genome 230 2.0 Array 1368439_at - -
Rat Genome 230 2.0 Array 1391699_PM_at - -
Affymetrix HT Rat Focus Array 1368439_PM_at - -
Affymetrix HT Rat Focus Array 1368439_at - -
Affymetrix Rat Clariom S Assay PSR0700027376.rn.1 TC0700003488.rn.1 RTA TC
Rat Expression Set 230 1368439_at - -
Rat Expression Set 230 1368439_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10905378 - -
Rat Genome U34 Set AJ001029_at - -
Rat Genome U34 Set AJ001029_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21723800 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1366090 - -
RatRef-12 Expression BeadChip ILMN_53973 - -

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