Gata6
Genomic Map
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| Gene Symbol: Gata6 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_019185.1 | NP_062058.1 | 4 - 5 | 1182 | 95 | |
| GenBank mRNA | L22760.1 | - | 4 - 5 | 1182 | 95 | |
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1800000033.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
liver development
outflow tract septum morphogenesis
type B pancreatic cell differentiation
pancreatic A cell differentiation
transcription, DNA-templated
transcription from RNA polymerase II promoter
phospholipid metabolic process
endodermal cell fate determination
male gonad development
response to toxic substance
regulation of gene expression
cardiac muscle hypertrophy in response to stress
positive regulation of BMP signaling pathway
epithelial cell differentiation
pancreas development
negative regulation of transforming growth factor beta1 production
negative regulation of transforming growth factor beta2 production
tube morphogenesis
endodermal cell differentiation
odontogenesis of dentin-containing tooth
response to drug
positive regulation of apoptotic process
negative regulation of apoptotic process
response to estrogen
positive regulation of angiogenesis
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
organ formation
cardiac muscle tissue development
smooth muscle cell differentiation
response to cAMP
positive regulation of cardioblast differentiation
cardiac muscle cell differentiation
positive regulation of cardiac muscle cell proliferation
lung saccule development
Clara cell differentiation
Type II pneumocyte differentiation
intestinal epithelial cell differentiation
cardiac vascular smooth muscle cell differentiation
response to growth factor
positive regulation of cell cycle arrest
cellular response to gonadotropin stimulus
cellular response to hypoxia
cellular response to BMP stimulus
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
RNA polymerase II repressing transcription factor binding
enhancer sequence-specific DNA binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
transcription factor binding
zinc ion binding
protein kinase binding
sequence-specific DNA binding
transcription regulatory region DNA binding
negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
liver development
outflow tract septum morphogenesis
type B pancreatic cell differentiation
pancreatic A cell differentiation
transcription, DNA-templated
transcription from RNA polymerase II promoter
phospholipid metabolic process
endodermal cell fate determination
male gonad development
response to toxic substance
regulation of gene expression
cardiac muscle hypertrophy in response to stress
positive regulation of BMP signaling pathway
epithelial cell differentiation
pancreas development
negative regulation of transforming growth factor beta1 production
negative regulation of transforming growth factor beta2 production
tube morphogenesis
endodermal cell differentiation
odontogenesis of dentin-containing tooth
response to drug
positive regulation of apoptotic process
negative regulation of apoptotic process
response to estrogen
positive regulation of angiogenesis
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
organ formation
cardiac muscle tissue development
smooth muscle cell differentiation
response to cAMP
positive regulation of cardioblast differentiation
cardiac muscle cell differentiation
positive regulation of cardiac muscle cell proliferation
lung saccule development
Clara cell differentiation
Type II pneumocyte differentiation
intestinal epithelial cell differentiation
cardiac vascular smooth muscle cell differentiation
response to growth factor
positive regulation of cell cycle arrest
cellular response to gonadotropin stimulus
cellular response to hypoxia
cellular response to BMP stimulus
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
RNA polymerase II repressing transcription factor binding
enhancer sequence-specific DNA binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
transcription factor binding
zinc ion binding
protein kinase binding
sequence-specific DNA binding
transcription regulatory region DNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P415349 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 837212 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 963373 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 249594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 959603 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 651750 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 588720 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 540190 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 527004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 313493 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 54823 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 508826 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 231344 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 580633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 400596 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719007 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70826 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 154256 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 129105 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 213641 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 368597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 433964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 368447 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 683878 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 164683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 180456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 132052 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 9024 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P415349 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P415349 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P415349 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P868714 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P415354 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P445300 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P415349 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 27245 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 2691 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10800172 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800170 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800168 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800169 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800167 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800171 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10800166 | - | - |
| Rat Genome 230 2.0 Array | 1374335_at | - | - |
| Rat Genome 230 2.0 Array | 1374335_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368827_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368828_at | - | - |
| Rat Genome 230 2.0 Array | 1368827_at | - | - |
| Rat Genome 230 2.0 Array | 1375613_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1375613_at | - | - |
| Rat Genome 230 2.0 Array | 1368828_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368828_at | - | - |
| Affymetrix HT Rat Focus Array | 1375613_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368827_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1375613_at | - | - |
| Affymetrix HT Rat Focus Array | 1368828_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368827_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1800000267.rn.1 | TC1800000033.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1800000268.rn.1 | TC1800000033.rn.1 | RTA TC |
| Rat Expression Set 230 | 1375613_PM_at | - | - |
| Rat Expression Set 230 | 1368828_at | - | - |
| Rat Expression Set 230 | 1368827_at | - | - |
| Rat Expression Set 230 | 1374335_at | - | - |
| Rat Expression Set 230 | 1374335_PM_at | - | - |
| Rat Expression Set 230 | 1368828_PM_at | - | - |
| Rat Expression Set 230 | 1375613_at | - | - |
| Rat Expression Set 230 | 1368827_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10800166 | - | - |
| Rat Genome U34 Set | rc_AA955182_at | - | - |
| Rat Genome U34 Set | rc_AA800786_at | - | - |
| Rat Genome U34 Set | rc_AA955182_g_at | - | - |
| Rat Genome U34 Set | L22760_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20725560 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1363338 | - | - |
| RatRef-12 Expression BeadChip | ILMN_66463 | - | - |
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