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See other NUP54 GE Assays ›
Gene Symbol:
Nup54
Gene Name:
nucleoporin 54
Gene Aliases:
-
Chromosome Location:
Chr.14: 17123531 - 17141832 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00569362_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Nup54
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_017361.1 NP_059057.1 1 - 2 137 77
GenBank mRNA BC078858.1 - 1 - 2 167 7134682 77
U63840.1 - 1 - 2 137 77

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000250.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Transporter Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nup54

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Function(s) Process(es)

protein targeting
nucleocytoplasmic transport
mRNA transport
nucleocytoplasmic transporter activity
protein binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P501204 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 324005 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 392677 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 442675 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 877704 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 407618 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 764494 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 689646 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 359540 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 283486 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 465523 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 176725 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 453209 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 783380 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 128053 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 110167 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 133082 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P501204 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P501204 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P501204 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P501204 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700775336 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 7026 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 32127 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 81881 - -
Agilent Rat cDNA Microarray (G4105A) 700775336 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10771637 - -
Affymetrix Rat Gene 1.0 ST Array 10771640 - -
Affymetrix Rat Gene 1.0 ST Array 10771647 - -
Affymetrix Rat Gene 1.0 ST Array 10771646 - -
Affymetrix Rat Gene 1.0 ST Array 10771643 - -
Affymetrix Rat Gene 1.0 ST Array 10771642 - -
Affymetrix Rat Gene 1.0 ST Array 10771644 - -
Affymetrix Rat Gene 1.0 ST Array 10771645 - -
Affymetrix Rat Gene 1.0 ST Array 10771648 - -
Affymetrix Rat Gene 1.0 ST Array 10771636 - -
Affymetrix Rat Gene 1.0 ST Array 10771641 - -
Affymetrix Rat Gene 1.0 ST Array 10771638 - -
Affymetrix Rat Gene 1.0 ST Array 10771639 - -
Affymetrix Rat Gene 1.1 ST Array 10771635 - -
Rat Genome 230 2.0 Array 1380691_at - -
Rat Genome 230 2.0 Array 1380691_PM_at - -
Rat Genome 230 2.0 Array 1367803_PM_at - -
Rat Genome 230 2.0 Array 1367803_at - -
Affymetrix HT Rat Focus Array 1367803_at - -
Affymetrix HT Rat Focus Array 1367803_PM_at - -
Affymetrix Rat Clariom S Assay PSR1400001940.rn.1 TC1400000250.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1400001935.rn.1 TC1400000250.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1400001936.rn.1 TC1400000250.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1400001937.rn.1 TC1400000250.rn.1 RTA TC
Rat Expression Set 230 1367803_at - -
Rat Expression Set 230 1367803_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10771635 - -
Rat Genome U34 Set U63840_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22287974 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1366358 - -
RatRef-12 Expression BeadChip ILMN_63070 - -

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