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See other ATP2A2 GE Assays ›
Gene Symbol:
Atp2a2
Gene Name:
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Gene Aliases:
Serca2, SercaII
Chromosome Location:
Chr.12: 39553903 - 39603326 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00568762_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Atp2a2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001110139.2 NP_001103609.1 5 - 6 971 83
NM_001110823.2 NP_001104293.1 5 - 6 971 83
NR_027839.1 5 - 6 971 83
GenBank mRNA J04022.1 - 5 - 6 969 83
J04023.1 - 5 - 6 604 83
J04024.1 - 5 - 6 703 83
X15635.1 - 5 - 6 672 83

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000643.rn.1

Set Membership:

Amplicon length between 71 and 85 Ion Channel Transporter Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Function(s) Process(es)

regulation of the force of heart contraction
calcium ion transport
cellular calcium ion homeostasis
regulation of muscle contraction
ER-nucleus signaling pathway
organelle organization
metabolic process
regulation of cardiac muscle contraction by calcium ion signaling
transition between fast and slow fiber
endoplasmic reticulum calcium ion homeostasis
positive regulation of endoplasmic reticulum calcium ion concentration
T-tubule organization
response to endoplasmic reticulum stress
response to peptide hormone
negative regulation of heart contraction
relaxation of cardiac muscle
sarcoplasmic reticulum calcium ion transport
calcium ion transmembrane transport
regulation of cardiac muscle cell membrane potential
regulation of cardiac muscle cell action potential involved in regulation of contraction
regulation of calcium ion-dependent exocytosis of neurotransmitter
calcium ion transport from cytosol to endoplasmic reticulum
calcium ion import into sarcoplasmic reticulum
calcium-transporting ATPase activity
calcium ion binding
protein binding
ATP binding
protein C-terminus binding
enzyme binding
lutropin-choriogonadotropic hormone receptor binding
S100 protein binding
metal ion binding
calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Rat Clariom S Assay PSR1200005690.rn.1 TC1200000643.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR1200005691.rn.1 TC1200000643.rn.1 RTA TC

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