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See other APOC1 GE Assays ›
Gene Symbol:
Apoc1
Gene Name:
apolipoprotein C-I
Gene Aliases:
ALPCI, Apo-CIB, ApoC-IB, LRRG04
Chromosome Location:
Chr.1: 80606638 - 80609921 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00563194_m1
Best Coverage
Size
Availability Inventoried
Catalog # 4331182
Price 244.00
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200.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apoc1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001109996.1 NP_001103466.1 3 - 4 260 85
NM_012824.2 NP_036956.1 2 - 3 295 85
GenBank mRNA AY327505.1 - 3 - 4 277 85
BC098670.1 - 2 - 3 234 7372566 85
FQ210440.1 - 3 - 4 260 85
FQ210757.1 - 3 - 4 249 85
FQ211211.1 - 3 - 4 261 85
FQ212377.1 - 3 - 4 260 85
X15512.1 - 2 - 3 295 85

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100004934.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Transporter 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoc1

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Function(s) Process(es)

triglyceride metabolic process
lipid transport
cholesterol metabolic process
negative regulation of phosphatidylcholine catabolic process
negative regulation of very-low-density lipoprotein particle clearance
regulation of lipid transport
negative regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
plasma lipoprotein particle remodeling
chylomicron remnant clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity
molecular_function
phospholipase inhibitor activity
fatty acid binding
lipase inhibitor activity

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P495969 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 776370 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 816337 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 145809 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 98858 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P495969 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P495969 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P495969 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P495969 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700610175 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 31015 - -
Agilent Rat cDNA Microarray (G4105A) 700610175 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10719525 - -
Affymetrix Rat Gene 1.0 ST Array 10719529 - -
Affymetrix Rat Gene 1.0 ST Array 10719526 - -
Affymetrix Rat Gene 1.0 ST Array 10719527 - -
Affymetrix Rat Gene 1.0 ST Array 10719528 - -
Affymetrix Rat Gene 1.1 ST Array 10719524 - -
Rat Genome 230 2.0 Array 1368587_PM_at - -
Rat Genome 230 2.0 Array 1368587_at - -
Affymetrix HT Rat Focus Array 1368587_PM_at - -
Affymetrix HT Rat Focus Array 1368587_at - -
Affymetrix Rat Clariom S Assay PSR0100039010.rn.1 TC0100004934.rn.1 RTA TC
Rat Expression Set 230 1368587_at - -
Rat Expression Set 230 1368587_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10719524 - -
Rat Genome U34 Set X15512_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21814611 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1371556 - -
RatRef-12 Expression BeadChip ILMN_48743 - -

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