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See other APOD GE Assays ›
Gene Symbol:
Apod
Gene Name:
apolipoprotein D
Gene Aliases:
AOPDGN
Chromosome Location:
Chr.11: 72705204 - 72726263 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00562832_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apod
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_012777.1 NP_036909.1 3 - 4 315 74
GenBank mRNA FQ212999.1 - 3 - 4 315 74
X55572.1 - 3 - 4 315 74

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100000784.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apod

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Function(s) Process(es)

response to reactive oxygen species
glucose metabolic process
lipid metabolic process
transport
brain development
aging
negative regulation of platelet-derived growth factor receptor signaling pathway
peripheral nervous system axon regeneration
tissue regeneration
negative regulation of protein import into nucleus
response to drug
negative regulation of smooth muscle cell proliferation
response to axon injury
negative regulation of focal adhesion assembly
negative regulation of lipoprotein lipid oxidation
negative regulation of monocyte chemotactic protein-1 production
negative regulation of cytokine production involved in inflammatory response
negative regulation of smooth muscle cell-matrix adhesion
negative regulation of T cell migration
molecular_function
transporter activity
cholesterol binding

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P11558 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11558 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11558 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P11558 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11558 - -
Matsumoto (Agilent Rat cDNA Microarray G4105A) 700862243 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 51453 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 96982 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 95535 - -
Agilent Rat cDNA Microarray (G4105A) 700862243 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10940639 - -
Affymetrix Rat Gene 1.1 ST Array 10940639 - -
Rat Genome 230 2.0 Array 1398258_at - -
Rat Genome 230 2.0 Array 1398258_PM_at - -
Affymetrix HT Rat Focus Array 1398258_PM_at - -
Affymetrix HT Rat Focus Array 1398258_at - -
Affymetrix Rat Clariom S Assay PSR1100004273.rn.1 TC1100000784.rn.1 RTA TC
Rat Expression Set 230 1398258_at - -
Rat Expression Set 230 1398258_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10940639 - -
Rat Genome U34 Set X55572_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 22403397 - -

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