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See other APOC3 GE Assays ›
Gene Symbol:
Apoc3
Gene Name:
apolipoprotein C-III
Gene Aliases:
ApoC-III, apo-CIII
Chromosome Location:
Chr.8: 50529318 - 50531533 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00560743_g1
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Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Apoc3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271053.1 NP_001257982.1 2 - 3 180 85
NM_012501.2 NP_036633.2 2 - 3 137 85
XM_008766144.1 XP_008764366.1 2 - 3 172 85
XM_008766146.1 XP_008764368.1 2 - 3 150 85
GenBank mRNA AW917416.1 - 2 - 3 89 85
FQ209522.1 - 2 - 3 104 85
FQ209891.1 - 2 - 3 106 85
FQ210075.1 - 2 - 3 137 85
FQ210397.1 - 2 - 3 104 85
FQ210428.1 - 2 - 3 108 85
FQ210554.1 - 2 - 3 105 85
FQ210884.1 - 2 - 3 103 85
FQ211165.1 - 2 - 3 104 85
FQ211318.1 - 2 - 3 106 85
FQ211343.1 - 2 - 3 106 85
FQ211392.1 - 2 - 3 108 85
FQ211416.1 - 2 - 3 109 85
FQ211454.1 - 2 - 3 108 85
FQ218088.1 - 2 - 3 136 85
FQ218207.1 - 2 - 3 136 85
FQ218211.1 - 2 - 3 180 85
FQ218286.1 - 2 - 3 107 85
FQ219230.1 - 2 - 3 104 85

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002454.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Transporter 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoc3

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Function(s) Process(es)

triglyceride metabolic process
triglyceride mobilization
lipid transport
inflammatory response
G-protein coupled receptor signaling pathway
response to nutrient
cholesterol metabolic process
negative regulation of triglyceride catabolic process
negative regulation of very-low-density lipoprotein particle remodeling
negative regulation of very-low-density lipoprotein particle clearance
negative regulation of high-density lipoprotein particle clearance
negative regulation of low-density lipoprotein particle clearance
triglyceride catabolic process
regulation of Cdc42 protein signal transduction
cholesterol efflux
phospholipid efflux
high-density lipoprotein particle remodeling
chylomicron remnant clearance
lipoprotein metabolic process
response to drug
cholesterol homeostasis
lipoprotein transport
response to peptide hormone
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity
negative regulation of cholesterol import
triglyceride homeostasis
cellular response to glucose stimulus
lipid transporter activity
phospholipid binding
enzyme regulator activity
lipase inhibitor activity
high-density lipoprotein particle receptor binding

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P327799 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P327799 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P327799 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P327799 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11435 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P327799 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10940680 - -
Affymetrix Rat Gene 1.1 ST Array 10940680 - -
Rat Genome 230 2.0 Array 1370009_at - -
Rat Genome 230 2.0 Array 1370009_PM_at - -
Affymetrix HT Rat Focus Array 1370009_PM_at - -
Affymetrix HT Rat Focus Array 1370009_at - -
Affymetrix Rat Clariom S Assay PSR0800019791.rn.1 TC0800002454.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019781.rn.1 TC0800002454.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019782.rn.1 TC0800002454.rn.1 RTA TC
Affymetrix Rat Clariom S Assay PSR0800019787.rn.1 TC0800002454.rn.1 RTA TC
Rat Expression Set 230 1370009_at - -
Rat Expression Set 230 1370009_PM_at - -
Affymetrix Rat Gene 1.0 ST Array 10940680 - -
Rat Genome U34 Set J02596cds_at - -
Rat Genome U34 Set J02596cds_g_at - -
Rat Genome U34 Set rc_AI169758_at - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21815446 - -

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