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Gene Symbol:
Pcmt1
Gene Name:
protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
Gene Aliases:
PCM
Chromosome Location:
Chr.1: 1734863 - 1767759 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00476604_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pcmt1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_013073.3 NP_037205.2 6 - 7 608 74
GenBank mRNA BC088417.1 - 6 - 7 608 7123213 74
D11475.1 - 6 - 7 468 74

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100003951.rn.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pcmt1

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Function(s) Process(es)

protein methylation
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P014527 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 455711 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 204630 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 447946 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 916762 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 50470 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 46308 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 465862 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 102875 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 450182 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 54004 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 127725 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 165176 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 169028 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P014527 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P014527 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P014527 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P484806 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P493747 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 11119 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 66241 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10716641 - -
Affymetrix Rat Gene 1.0 ST Array 10716637 - -
Affymetrix Rat Gene 1.0 ST Array 10716635 - -
Affymetrix Rat Gene 1.0 ST Array 10716642 - -
Affymetrix Rat Gene 1.0 ST Array 10716643 - -
Affymetrix Rat Gene 1.0 ST Array 10716640 - -
Affymetrix Rat Gene 1.0 ST Array 10716636 - -
Affymetrix Rat Gene 1.0 ST Array 10716638 - -
Affymetrix Rat Gene 1.0 ST Array 10716639 - -
Affymetrix Rat Gene 1.1 ST Array 10716634 - -
Rat Genome 230 2.0 Array 1387258_a_at - -
Rat Genome 230 2.0 Array 1387258_PM_a_at - -
Rat Genome 230 2.0 Array 1371966_PM_at - -
Rat Genome 230 2.0 Array 1371966_at - -
Affymetrix HT Rat Focus Array 1371966_at - -
Affymetrix HT Rat Focus Array 1387258_a_at - -
Affymetrix HT Rat Focus Array 1371966_PM_at - -
Affymetrix HT Rat Focus Array 1387258_PM_a_at - -
Affymetrix Rat Clariom S Assay PSR0100032245.rn.1 TC0100003951.rn.1 RTA TC
Rat Expression Set 230 1387258_PM_a_at - -
Rat Expression Set 230 1387258_a_at - -
Rat Expression Set 230 1371966_PM_at - -
Rat Expression Set 230 1371966_at - -
Affymetrix Rat Gene 1.0 ST Array 10716634 - -
Rat Genome U34 Set M26686_at - -
Rat Genome U34 Set M26686_g_at - -
Rat Genome U34 Set rc_AI178024_at - -
Rat Genome U34 Set rc_AA849797_at - -
Rat Genome U34 Set rc_AI104517_at - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1365789 - -
RatRef-12 Expression BeadChip ILMN_50157 - -

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