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See other CDX4 GE Assays ›
Gene Symbol:
Cdx4
Gene Name:
caudal type homeo box 4
Gene Aliases:
RGD1561529
Chromosome Location:
Chr.X: 74165172 - 74173758 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID Rn00432452_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cdx4
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001106942.1 NP_001100412.1 2 - 3 826 61

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More Information


Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00000674.rn.1

Set Membership:

Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
blood vessel development
placenta development
anterior/posterior pattern specification
positive regulation of transcription from RNA polymerase II promoter
labyrinthine layer development
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name Probe IDs Targets Target Type
Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P042031 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 815272 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 831022 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 875666 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 620072 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 938651 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 201246 - -
Agilent SurePrint G3 Rat CGH Microarray 1x1M 112261 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 128557 - -
Agilent SurePrint G3 Rat CGH Microarray 4x180K 44876 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P042031 - -
Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P042031 - -
Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P042031 - -
SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P281523 - -
Agilent Rat Genome CGH Microarray 105A (G4436A) 38100 - -
Array Name Probe IDs Targets Target Type
Affymetrix Rat Gene 1.0 ST Array 10934498 - -
Affymetrix Rat Gene 1.0 ST Array 10934497 - -
Affymetrix Rat Gene 1.0 ST Array 10934499 - -
Affymetrix Rat Gene 1.1 ST Array 10934496 - -
Affymetrix Rat Clariom S Assay PSR0X00004329.rn.1 TC0X00000674.rn.1 RTA TC
Affymetrix Rat Gene 1.0 ST Array 10934496 - -
Array Name Probe IDs Targets Target Type
ABI Rat Genome Survey Microarray 21512283 - -
Array Name Probe IDs Targets Target Type
Illumina ratRef-12 v1.0 expression beadchip ILMN_1364168 - -

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