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See other A330069E16RIK GE Assays ›
Gene Symbol:
A330069E16Rik
Gene Name:
RIKEN cDNA A330069E16 gene
Gene Aliases:
-
Chromosome Location:
Chr.2: 91237146 - 91238357 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm04412285_g1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: A330069E16Rik
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_015464.1 1 - 2 252 95
GenBank mRNA AK039596.1 - 1 - 2 202 95
BC042745.1 - 1 - 2 253 95
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DV661145.1 - 1 - 2 231 Chr. 2 - 91237239 - 91238052 [+] on Build GRCm38 95
GenBankmRNA BY724330.1 - 1 - 2 200 Chr. 2 - 91237198 - 91238055 [+] on Build GRCm38 95
GenBankmRNA BI101831.1 - 1 - 2 251 Chr. 2 - 91237146 - 91237989 [+] on Build GRCm38 95

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream damage specific DNA binding protein 2 Ddb2 2610043A19Rik -14.0 Anti-sense Chr. 2 - 91211579 - 91237132 on NCBI Build GRCm38
Downstream protein kinase C and casein kinase substrate in neurons 3 Pacsin3 4921507A02Rik,
6330413E15Rik,
AW413130
17.7kb Sense Chr. 2 - 91256098 - 91264680 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200001372.mm.1

Set Membership:

Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

biological_process
molecular_function

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0200010595.mm.1 NR_015464.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010595.mm.1 NR_015464.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010595.mm.1 TC0200001372.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0200010598.mm.1 NR_015464.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010598.mm.1 NR_015464.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010598.mm.1 TC0200001372.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0200010596.mm.1 NR_015464.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010596.mm.1 NR_015464.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200010596.mm.1 TC0200001372.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 406884 - -

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