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See other RUNX2 GE Assays ›
Gene Symbol:
Runx2
Gene Name:
runt related transcription factor 2
Gene Aliases:
AML3, Cbf, Cbfa-1, Cbfa1, LS3, Osf2, PEBP2aA, Pebp2a1, Pebpa2a
Chromosome Location:
Chr.17: 44495986 - 44814831 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm04410156_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Runx2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_073392.1 2 - 3 427 81
GenBank mRNA AF053954.1 - 2 - 3 257 81
AF053955.1 - 1 - 2 91 81
DQ458792.1 - 2 - 3 428 81

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream suppressor of Ty 3 Supt3 2310066G22Rik,
AI315192,
SPT3,
SPT3L,
Supt3h
Anti-sense Chr. 17 - 44777171 - 45119294 on NCBI Build GRCm38
Downstream RIKEN cDNA 4930564C03 gene 4930564C03Rik 65.4kb Sense Chr. 17 - 44879704 - 44880885 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700002138.mm.1

Set Membership:

Amplicon length between 71 and 85 Mus musculus 1700 Probe spans exons

Panther Classification:

Molecular Function -

Runt transcription factor

Gene Ontology Categories:

Function(s) Process(es)

skeletal system development
osteoblast differentiation
endochondral ossification
osteoblast fate commitment
chondrocyte differentiation
chondrocyte development
osteoblast development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of cell proliferation
positive regulation of gene expression
hemopoiesis
neuron differentiation
T cell differentiation
regulation of ossification
BMP signaling pathway
positive regulation of chondrocyte differentiation
embryonic forelimb morphogenesis
regulation of fibroblast growth factor receptor signaling pathway
odontogenesis of dentin-containing tooth
regulation of odontogenesis of dentin-containing tooth
regulation of osteoblast differentiation
positive regulation of osteoblast differentiation
positive regulation of ossification
negative regulation of smoothened signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
cell maturation
embryonic cranial skeleton morphogenesis
skeletal system morphogenesis
stem cell differentiation
cellular response to BMP stimulus
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding
ATP binding
transcription factor binding
protein domain specific binding
histone deacetylase binding
bHLH transcription factor binding
transcription regulatory region DNA binding
repressing transcription factor binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1700020027.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020027.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020025.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020025.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020025.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020025.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020025.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_001145920.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_001271630.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_001271631.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 NR_073425.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020009.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020019.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020019.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020019.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020019.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020019.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020026.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020026.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020026.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020026.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020026.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020020.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020020.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020020.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020020.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020020.mm.1 TC1700002138.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700020022.mm.1 NM_001146038.2 Refseq
Affymetrix Mouse Clariom S Array PSR1700020022.mm.1 NM_001271627.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020022.mm.1 NM_009820.5 Refseq
Affymetrix Mouse Clariom S Array PSR1700020022.mm.1 NR_073392.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700020022.mm.1 TC1700002138.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 507825 - -

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Host server : magellan-search-5fc94fc45-hqqk4:80/100.66.128.142:80.
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git-url: https://github.com/thermofisher/magellan-search
git-branch: release/2.37.0-2025.10.41-1.0