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See other SMIM10L1 GE Assays ›
Gene Symbol:
Smim10l1
Gene Name:
small integral membrane protein 10 like 1
Gene Aliases:
2700089E24Rik, AI662692
Chromosome Location:
Chr.6: 133104914 - 133110899 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm04410122_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smim10l1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_073368.1 2 - 3 538 77
GenBank mRNA AA048533.1 - 2 - 3 77
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AA041704.1 - 2 - 3 Chr. 6 - 133106368 - 133110899 [-] on Build GRCm38 77
GenBankmRNA AA041690.1 - 2 - 3 Chr. 6 - 133105503 - 133110899 [-] on Build GRCm38 77

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream taste receptor,
type 2,
member 140
Tas2r140 T2R40,
T2r34,
TRB3,
TRB5,
Tas2r13,
Tas2r137,
Tas2r40,
Tas2r8,
mTRB3,
mt2r64
-50.6kb Anti-sense Chr. 6 - 133054855 - 133055793 on NCBI Build GRCm38
Downstream RIKEN cDNA 5530400C23 gene 5530400C23Rik GRP 184.2kb Sense Chr. 6 - 133292216 - 133295790 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600001571.mm.1

Set Membership:

Amplicon length between 71 and 85 3' Most Mus musculus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

biological_process
molecular_function

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0600012641.mm.1 NM_001271582.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012641.mm.1 NM_001271583.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012641.mm.1 NR_073368.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012641.mm.1 TC0600001571.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0600012638.mm.1 NM_001271583.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012638.mm.1 NR_073368.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012638.mm.1 TC0600001571.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0600012639.mm.1 NM_001271583.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012639.mm.1 NR_073368.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600012639.mm.1 TC0600001571.mm.1 MTA TC

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