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See other AY512931 GE Assays ›
Gene Symbol:
AY512931
Gene Name:
cDNA sequence AY512931
Gene Aliases:
-
Chromosome Location:
Chr.8: 45060702 - 45065418 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm04240197_g1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: AY512931
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_033588.1 1 - 2 327 86
GenBank mRNA AY512931.1 - 1 - 2 325 86
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BQ558770.1 - 1 - 2 325 Chr. 8 - 45063190 - 45065418 [-] on Build GRCm38 86
GenBankmRNA CA531541.1 - 1 - 2 325 Chr. 8 - 45063179 - 45065418 [-] on Build GRCm38 86

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream FAT tumor suppressor homolog 1 (Drosophila) Fat1 2310038E12Rik,
AU023433,
Fath,
mFat1
-12.7kb Anti-sense Chr. 8 - 44934725 - 45052257 on NCBI Build GRCm38
Downstream melatonin receptor 1A Mtnr1a MR,
MelR
3.8kb Anti-sense Chr. 8 - 45069210 - 45089233 on NCBI Build GRCm38

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More Information


Additional Information:

This assay is in the 5'UTR region of the AY512931.1 transcripts.

Set Membership:

Amplicon length between 86 and 100 Detect Genomic DNA Mus musculus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

biological_process
molecular_function

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0800016436.mm.1 NR_033588.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0800016436.mm.1 NR_033588.1 Refseq
Affymetrix Mouse Clariom S Array PSR0800016436.mm.1 TC0800002140.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0800016437.mm.1 NR_033588.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0800016437.mm.1 NR_033588.1 Refseq
Affymetrix Mouse Clariom S Array PSR0800016437.mm.1 TC0800002140.mm.1 MTA TC

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