Name: [Mm03947402_m1] [D130020L05Rik]
Creator: Thermo Fisher Scientific
Keywords: [D130020L05Rik] Assay, [RIKEN cDNA D130020L05 gene] Assay

Assay Details

Gene Symbol: D130020L05Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038049.1		1 - 2	1573		99
GenBank mRNA	AK087910.1	-	1 - 2	1547		100
GenBank mRNA	BX512124.1	-	1 - 2	112		99

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CF198210.1	-	1 - 2	80	Chr. 12 - 101083945 - 101088175 [+] on Build GRCm38	99
GenBankmRNA	BG100603.1	-	1 - 2	196	Chr. 12 - 101083828 - 101088183 [+] on Build GRCm38	99
GenBankmRNA	CA458682.1	-		101	Chr. - - [-] on Build	99
GenBankmRNA	AA404206.1	-	1 - 2	111	Chr. 12 - 101083913 - 101088178 [+] on Build GRCm38	99

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	Smek1	1110034C04Rik, BC064465, mKIAA2010		Anti-sense	Chr. 12 - 101039409 - 101083702 on NCBI Build GRCm38
Downstream	kinesin family member 4, pseudogene	Kif4-ps	4930463M05Rik, Kif4b	56.7kb	Sense	Chr. 12 - 101145609 - 101149273 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200001000.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038047.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038047.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038048.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038048.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038049.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038049.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007011.mm.1	TC1200001000.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038047.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038047.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038048.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038048.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038049.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038049.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007013.mm.1	TC1200001000.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038047.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038047.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038048.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038048.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038049.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038049.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007022.mm.1	TC1200001000.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038047.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038047.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038048.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038048.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038049.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038049.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007012.mm.1	TC1200001000.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038047.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038047.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038048.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038048.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038049.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038049.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007014.mm.1	TC1200001000.mm.1	MTA TC

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Catalog #	4426961
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Genomic Map