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See other SFPQ GE Assays ›
Gene Symbol:
Sfpq
Gene Name:
splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Gene Aliases:
1110004P21Rik, 2810416M14Rik, 5730453G22Rik, 9030402K04Rik, AU021830, D4Ertd314e, Gm12940, OTTMUSG00000009329, PSF, REP1
Chromosome Location:
Chr.4: 127020560 - 127037016 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm03941385_s1
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Availability Made To Order
Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sfpq
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AK017658.1 - 1 151 94
AK141302.1 - 1 1445 94
BC033603.1 - 1 2843 94
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BY717438.1 - 1 151 Chr. 4 - 127034571 - 127034950 [+] on Build GRCm38 94
GenBankmRNA AU021761.1 - 1 Chr. 4 - 127034380 - 127034949 [-] on Build GRCm38 94
GenBankmRNA BM934843.1 - 1 280 Chr. 4 - 127034443 - 127035091 [+] on Build GRCm38 94
GenBankmRNA AU021830.1 - 1 Chr. 14 - 15098235 - 15098736 [+] on Build GRCm38 94
GenBankmRNA BG061796.2 - 1 Chr. 4 - 127034459 - 127034949 [-] on Build GRCm38 94
GenBankmRNA CX207240.1 - 1 237 Chr. 4 - 127034485 - 127034993 [+] on Build GRCm38 94
GenBankmRNA BG068037.2 - 1 Chr. 4 - 127034381 - 127034949 [-] on Build GRCm38 94
GenBankmRNA CD547993.1 - 1 Chr. 4 - 127034477 - 127034949 [-] on Build GRCm38 94
GenBankmRNA AW554262.2 - 1 Chr. 4 - 127034478 - 127034949 [-] on Build GRCm38 94
GenBankmRNA CD770415.1 - 1 114 Chr. 4 - 127034611 - 127035245 [+] on Build GRCm38 94
GenBankmRNA AW910609.1 - 1 Chr. 4 - 127034482 - 127034952 [-] on Build GRCm38 94
GenBankmRNA AU035904.1 - 1 437 Chr. 4 - 127034285 - 127035025 [+] on Build GRCm38 94

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream zinc finger,
MYM-type 4
Zmym4 6330503C17Rik,
AI480785,
AW493829,
CDIR,
D630001M21,
MYM,
Zfp262,
Znf262,
mKIAA0425
-65.2kb Anti-sense Chr. 4 - 126861819 - 126969370 on NCBI Build GRCm38
Downstream leucine rich repeat containing 3B Lrrc3b BC019794,
LRP15
258.8kb Anti-sense Chr. 14 - 15357515 - 15438987 on NCBI Build GRCm38

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

MicroArray Probes:

ABI

Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 530367 - -

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