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See other GT(ROSA)26SOR GE Assays ›
Gene Symbol:
Gt(ROSA)26Sor
Gene Name:
gene trap ROSA 26, Philippe Soriano
Gene Aliases:
AV258896, Gtrgeo26, Gtrosa26, R26, ROSA26
Chromosome Location:
Chr.6: 113067428 - 113077244 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm03456292_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Gt(ROSA)26Sor
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_027008.1
1 - 2 177 55
GenBank mRNA U83174.1 - LIT3416
Rosa26.1
1 - 2 130 55
U83175.1 - LIT3417
Rosa26.2
1 - 2 110 55
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CJ048065.1 - 1 - 2 115 Chr. 6 - 113071136 - 113077181 [-] on Build GRCm38 55
GenBankmRNA BE944913.1 - 1 - 2 52 Chr. 6 - 113071062 - 113077119 [-] on Build GRCm38 55
GenBankmRNA CJ094069.1 - 1 - 2 105 Chr. 6 - 113071070 - 113077170 [-] on Build GRCm38 55
GenBankmRNA CK616335.1 - 1 - 2 35 Chr. 6 - 113070874 - 113077102 [-] on Build GRCm38 55

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream THUMP domain containing 3 Thumpd3 AW556087,
Gt(ROSA)26asSor,
Gtrosa26as
-2.1kb Anti-sense Chr. 6 - 113046252 - 113068278 on NCBI Build GRCm38
Downstream SET domain containing 5 Setd5 2900045N06Rik,
C330007C20,
C85544,
mKIAA1757
427.0 Anti-sense Chr. 6 - 113077624 - 113153426 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002911.mm.1

Set Membership:

Amplicon length less than or equal to 70 3' Most Mus musculus 1700 Probe spans exons

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0600022326.mm.1 NR_027008.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022326.mm.1 NR_027008.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022326.mm.1 NR_027009.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022326.mm.1 NR_027009.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022326.mm.1 TC0600002911.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0600022327.mm.1 NR_027008.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022327.mm.1 NR_027008.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022327.mm.1 NR_027009.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022327.mm.1 NR_027009.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022327.mm.1 TC0600002911.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027008.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027008.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027009.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027009.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027010.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 NR_027010.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022328.mm.1 TC0600002911.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0600022330.mm.1 NR_027008.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022330.mm.1 NR_027008.1 Refseq
Affymetrix Mouse Clariom S Array PSR0600022330.mm.1 TC0600002911.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 484416 - -

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