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See other RNF44 GE Assays ›
Gene Symbol:
Rnf44
Gene Name:
ring finger protein 44
Gene Aliases:
AI854545, mKIAA1100
Chromosome Location:
Chr.13: 54679399 - 54693995 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01337446_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rnf44
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_027395.1 1 - 2 238 105
NR_027396.1 1 - 2 238 105
GenBank mRNA BC017630.1 - 1 - 2 114 4507289 105
BC035548.1 - 1 - 2 136 4221284 105
CJ147978.1 - 1 - 2 99 105
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BY074150.1 - 1 - 2 100 Chr. 13 - 54683969 - 54693821 [-] on Build GRCm38 105
GenBankmRNA BY008426.1 - 1 - 2 103 Chr. 13 - 54683993 - 54693825 [-] on Build GRCm38 105
GenBankmRNA BF321966.1 - 1 - 2 111 Chr. 13 - 54683632 - 54693833 [-] on Build GRCm38 105
GenBankmRNA BY007210.1 - 1 - 2 Chr. 13 - 54684370 - 54693813 [-] on Build GRCm38 106
GenBankmRNA CJ180893.1 - 1 - 2 159 Chr. 13 - 54683984 - 54693879 [-] on Build GRCm38 105
GenBankmRNA BY722280.1 - 1 - 2 78 Chr. 13 - 54683097 - 54693800 [-] on Build GRCm38 105
GenBankmRNA BY253115.1 - 1 - 2 79 Chr. 13 - 54683654 - 54693800 [-] on Build GRCm38 105
GenBankmRNA BY794562.1 - 1 - 2 128 Chr. 13 - 54684041 - 54693850 [-] on Build GRCm38 105
GenBankmRNA CK791638.1 - 1 - 2 124 Chr. 13 - 54683113 - 54693846 [-] on Build GRCm38 105
GenBankmRNA CJ176406.1 - 1 - 2 161 Chr. 13 - 54683717 - 54693882 [-] on Build GRCm38 105
GenBankmRNA BY124778.1 - 1 - 2 90 Chr. 13 - 54684007 - 54693811 [-] on Build GRCm38 105

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream Fas associated factor family member 2 Faf2 2210404D11Rik,
AI462440,
Ubxd8,
mKIAA0887
-20.3kb Anti-sense Chr. 13 - 54621775 - 54664063 on NCBI Build GRCm38
Downstream cadherin-related family member 2 Cdhr2 Gm624,
PC-LKC,
Pcdh24
7.6kb Anti-sense Chr. 13 - 54701463 - 54736662 on NCBI Build GRCm38

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More Information


Additional Information:

This assay is in the 5'UTR region of the BC017630.1, BC035548.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101 Mammalian Gene Collection Mus musculus Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

biological_process
molecular_function
zinc ion binding
metal ion binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1300012788.mm.1 NR_027395.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012788.mm.1 NR_027395.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012788.mm.1 NR_027396.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012788.mm.1 NR_027396.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012788.mm.1 TC1300002038.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146025.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146025.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146026.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146026.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146027.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_001146027.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_134064.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NM_134064.2 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NR_027395.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NR_027395.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NR_027396.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 NR_027396.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012774.mm.1 TC1300002038.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1300012793.mm.1 NR_027395.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012793.mm.1 NR_027395.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012793.mm.1 NR_027396.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012793.mm.1 NR_027396.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012793.mm.1 TC1300002038.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1300012794.mm.1 NR_027395.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012794.mm.1 NR_027395.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012794.mm.1 NR_027396.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012794.mm.1 NR_027396.1 Refseq
Affymetrix Mouse Clariom S Array PSR1300012794.mm.1 TC1300002038.mm.1 MTA TC

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