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See other RORC GE Assays ›
Gene Symbol:
Rorc
Gene Name:
RAR-related orphan receptor gamma
Gene Aliases:
Nr1f3, RORgamma, TOR, Thor
Chromosome Location:
Chr.3: 94372715 - 94398276 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01261022_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rorc
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001293734.1 NP_001280663.1 5 - 6 1028 54
NM_011281.3 NP_035411.2 6 - 7 1024 54
GenBank mRNA AF163668.1 - 5 - 6 955 54
AJ132394.1 - 5 - 6 1028 54
AK160122.1 - 6 - 7 982 54
BC014804.1 - 6 - 7 967 4489193 54
U39071.1 - 6 - 7 1000 54
U43508.1 - 6 - 7 962 54

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000864.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Nuclear Receptor Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rorc

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
protein phosphorylation
xenobiotic metabolic process
multicellular organism development
regulation of glucose metabolic process
regulation of steroid metabolic process
cell differentiation
interleukin-17 production
circadian regulation of gene expression
T cell differentiation in thymus
cellular response to sterol
T-helper cell differentiation
positive regulation of circadian rhythm
steroid hormone mediated signaling pathway
regulation of gamma-delta T cell differentiation
regulation of fat cell differentiation
positive regulation of transcription, DNA-templated
alpha-beta T cell differentiation
rhythmic process
lymph node development
mucosal-associated lymphoid tissue development
Peyer's patch development
adipose tissue development
regulation of transcription involved in cell fate commitment
negative regulation of thymocyte apoptotic process
T-helper 17 cell differentiation
transcription coactivator binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
oxysterol binding
zinc ion binding
sequence-specific DNA binding
metal ion binding
transcription factor activity, direct ligand regulated sequence-specific DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0300006599.mm.1 NM_011281.3 Refseq
Affymetrix Mouse Clariom S Array PSR0300006599.mm.1 TC0300000864.mm.1 MTA TC

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