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See other HDAC5 GE Assays ›
Gene Symbol:
Hdac5
Gene Name:
histone deacetylase 5
Gene Aliases:
AI426555, Hdac4, mHDA1, mKIAA0600
Chromosome Location:
Chr.11: 102195747 - 102230186 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01246076_m1
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Catalog # 4331182
Price 244.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001077696.1 NP_001071164.1 20 - 21 2949 81
NM_001284248.1 NP_001271177.1 22 - 23 3461 81
NM_001284249.1 NP_001271178.1 21 - 22 3058 81
NM_001284250.1 NP_001271179.1 20 - 21 2946 81
NM_010412.3 NP_034542.3 20 - 21 2946 81
GenBank mRNA AF006602.2 - 19 - 20 2659 81
AF207748.1 - 19 - 20 2578 81
AK122325.2 - 15 - 16 1988 81
AK139202.1 - 21 - 22 3032 81
AK145972.1 - 20 - 21 2912 81
AK146483.1 - 20 - 21 2885 81
AK155335.1 - 20 - 21 2920 81
AK156008.1 - 14 - 15 3783 81
AK157159.1 - 14 - 15 3783 81
BC023309.1 - 11 - 12 1499 81
BC049926.1 - 20 - 21 2880 81
BC058554.1 - 22 - 23 3413 81
BC060609.1 - 19 - 20 2740 5720438 81

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100003829.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hdac5

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
protein deacetylation
inflammatory response
nervous system development
heart development
negative regulation of gene expression
regulation of myotube differentiation
negative regulation of myotube differentiation
chromatin modification
histone deacetylation
B cell differentiation
multicellular organismal response to stress
regulation of gene expression, epigenetic
B cell activation
response to cocaine
response to drug
regulation of protein binding
negative regulation of osteoblast differentiation
negative regulation of striated muscle tissue development
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of skeletal muscle fiber development
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of striated muscle cell differentiation
renal tubule morphogenesis
cellular response to fluid shear stress
negative regulation of cell migration involved in sprouting angiogenesis
positive regulation of neural precursor cell proliferation
positive regulation of stem cell proliferation
RNA polymerase III transcription factor binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein kinase C binding
protein binding
transcription factor binding
hydrolase activity
protein kinase binding
histone deacetylase activity (H3-K14 specific)
NAD-dependent histone deacetylase activity (H3-K14 specific)
histone deacetylase activity (H3-K9 specific)
protein deacetylase activity
histone deacetylase activity (H4-K16 specific)
histone deacetylase binding
transcription regulatory region DNA binding
metal ion binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
repressing transcription factor binding
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_001077696.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_001077696.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_001284248.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_001284249.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_001284250.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_010412.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 NM_010412.3 Refseq
Affymetrix Mouse Clariom S Array PSR1100035525.mm.1 TC1100003829.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_001077696.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_001077696.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_001284248.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_001284249.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_001284250.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_010412.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 NM_010412.3 Refseq
Affymetrix Mouse Clariom S Array PSR1100035529.mm.1 TC1100003829.mm.1 MTA TC

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