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Gene Symbol:
Tdg Gm9855
Gene Name:
thymine DNA glycosylase
thymine DNA glycosylase pseudogene
Gene Aliases:
E130317C12Rik, JZA-3, Jza1
ENSMUSG00000051559
Chromosome Location:
Chr.10: 82629247 - 82650494 on Build GRCm38
Chromosome Location:
Chr.10: 42052558 - 42055453 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
-
Assay ID Mm01225357_g1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tdg
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_011561.2 NP_035691.2 8 - 9 1081 101
NM_172552.3 NP_766140.2 8 - 9 1180 101
GenBank mRNA AK053870.1 - 8 - 9 1108 101
AK164090.1 - 8 - 9 1041 101
AK164643.1 - 8 - 9 1148 101
AK169768.1 - 8 - 9 1104 101
BC010315.1 - 8 - 9 1070 3595866 101
BC085470.1 - 8 - 9 1127 6416434 101
BC085471.1 - 8 - 9 1151 6816716 101
Gene Symbol: Gm9855
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_037190.1 1 1077 101
GenBank mRNA AF069519.1 - 1 1038 101
AK089915.1 - 1 1081 101

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdg
Click here to find siRNAs for Gene Gm9855

Panther Classification:

Molecular Function -

DNA metabolism protein DNA glycosylase nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA repair
base-excision repair
mismatch repair
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
metabolic process
embryo development
chromatin modification
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
RNA polymerase II transcription cofactor activity
double-stranded DNA binding
protein kinase C binding
protein binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2 A_55_P2107398 - -
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2107402 AF069519.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2107402 AK089915.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2107402 NR_037190.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2107402 BC010315.1 mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2107402 AK169768.1 mouse_transcriptome
Array Name Probe IDs Targets Target Type
Affymetrix Mouse Gene 1.0 ST Array 10430872 - -
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007403.mm.1 TC1000000928.mm.1 MTA TC
Mouse Expression Set 430 1416790_a_at - -
Mouse Expression Set 430 1435715_PM_x_at - -
Mouse Expression Set 430 1435715_x_at - -
Mouse Expression Set 430 1448462_at - -
Mouse Expression Set 430 1416790_PM_a_at - -
Mouse Expression Set 430 1448462_PM_at - -
Murine Genome U74v2 Set 101540_PM_at - -
Murine Genome U74v2 Set 101540_at - -
Mouse Genome 430A 2.0 Array 1435715_x_at - -
Mouse Genome 430A 2.0 Array 1448462_at - -
Mouse Genome 430A 2.0 Array 1448462_PM_at - -
Mouse Genome 430A 2.0 Array 1416790_a_at - -
Mouse Genome 430A 2.0 Array 1435715_PM_x_at - -
Mouse Genome 430A 2.0 Array 1416790_PM_a_at - -
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 899929 - -
ABI Mouse Genome Survey Microarray 901333 - -

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