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See other WHSC1 GE Assays ›
Gene Symbol:
Whsc1
Gene Name:
Wolf-Hirschhorn syndrome candidate 1 (human)
Gene Aliases:
5830445G22Rik, 9430010A17Rik, AW555663, C130020C13Rik, D030027O06Rik, D930023B08Rik, MMSET, NSD2, Whsc1l, mKIAA1090
Chromosome Location:
Chr.5: 33820775 - 33897966 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01211103_g1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Whsc1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001081102.2 NP_001074571.2 3 - 4 952 61
NM_001177884.1 NP_001171355.1 3 - 4 952 61
NM_175231.2 NP_780440.2 3 - 4 952 61
GenBank mRNA AK038286.1 - 5 - 6 1161 61
BC079668.1 - 3 - 4 868 61
BC158094.1 - 4 - 5 1026 61
CF532498.1 - 3 - 4 489 61

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500000363.mm.1

Set Membership:

Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Inventoried Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
membranous septum morphogenesis
atrial septum primum morphogenesis
atrial septum secundum morphogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
histone H3-K36 methylation
chromatin modification
methylation
histone H4-K20 methylation
positive regulation of isotype switching to IgA isotypes
bone development
regulation of establishment of protein localization
regulation of double-strand break repair via nonhomologous end joining
DNA binding
chromatin binding
methyltransferase activity
zinc ion binding
transferase activity
histone-lysine N-methyltransferase activity
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0500003463.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003463.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003463.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003459.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003459.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003459.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003462.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003462.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003462.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003457.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003457.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003457.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003460.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003460.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003460.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003464.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003464.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003464.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003458.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003458.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003458.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_001081102.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_001081102.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_175231.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 NM_175231.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500003446.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003461.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003461.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003461.mm.1 TC0500000363.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0500003465.mm.1 NM_001177884.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003465.mm.1 NM_001177884.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500003465.mm.1 TC0500000363.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 309470 - -

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