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See other SCARB1 GE Assays ›
Gene Symbol:
Scarb1
Gene Name:
scavenger receptor class B, member 1
Gene Aliases:
AI120173, CD36, Cd36l1, Cla-1, Cla1, D5Ertd460e, Hdlq1, Hlb398, SR-B1, SR-BI, SRBI, Srb1, mSR-BI
Chromosome Location:
Chr.5: 125277087 - 125341111 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01198176_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Scarb1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001205082.1 NP_001192011.1 7 - 8 1228 88
NM_001205083.1 NP_001192012.1 7 - 8 1228 88
NM_016741.2 NP_058021.1 7 - 8 1228 88
GenBank mRNA AK010622.1 - 7 - 8 1153 88
AK028191.1 - 7 - 8 1209 88
AK033114.1 - 7 - 8 1153 88
AK145588.1 - 7 - 8 1154 88
AK154933.1 - 7 - 8 1220 88
AK158122.1 - 7 - 8 1153 88
AK169906.1 - 7 - 8 1204 88
AK171602.1 - 7 - 8 1208 88
BC004656.1 - 7 - 8 1208 3498018 88
CT010222.1 - 7 - 8 1016 88
U37799.1 - 7 - 8 1066 88

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500003271.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Apoptosis Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Scarb1

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

endothelial cell proliferation
pattern recognition receptor signaling pathway
androgen biosynthetic process
cholesterol catabolic process
lipid transport
receptor-mediated endocytosis
phagocytosis, recognition
cell adhesion
positive regulation of triglyceride biosynthetic process
positive regulation of cholesterol storage
regulation of phosphatidylcholine catabolic process
phospholipid transport
lipopolysaccharide transport
cholesterol transport
lipopolysaccharide-mediated signaling pathway
detection of lipopolysaccharide
cholesterol efflux
high-density lipoprotein particle remodeling
low-density lipoprotein particle clearance
high-density lipoprotein particle clearance
vitamin transmembrane transport
cholesterol homeostasis
blood vessel endothelial cell migration
recognition of apoptotic cell
reverse cholesterol transport
adhesion of symbiont to host
regulation of phagocytosis
positive regulation of nitric-oxide synthase activity
triglyceride homeostasis
cholesterol import
lipopolysaccharide binding
phosphatidylserine binding
lipopolysaccharide receptor activity
high-density lipoprotein particle binding
low-density lipoprotein particle binding
apolipoprotein binding
apolipoprotein A-I binding
protein homodimerization activity
high-density lipoprotein particle receptor activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_001205082.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_001205082.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_001205083.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_001205083.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_016741.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 NM_016741.2 Refseq
Affymetrix Mouse Clariom S Array PSR0500029599.mm.1 TC0500003271.mm.1 MTA TC

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