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See other RBFOX2 GE Assays ›
Gene Symbol:
Rbfox2
Gene Name:
RNA binding protein, fox-1 homolog (C. elegans) 2
Gene Aliases:
Fbm2, Fxh, Hrnbp2, Rbm9
Chromosome Location:
Chr.15: 77078990 - 77307053 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01197019_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rbfox2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001110827.2 NP_001104297.1 3 - 4 965 68
NM_001110828.2 NP_001104298.1 2 - 3 507 68
NM_001110829.2 NP_001104299.1 2 - 3 507 68
NM_001110830.2 NP_001104300.1 2 - 3 507 68
NM_001286417.1 NP_001273346.1 2 - 3 507 68
NM_053104.6 NP_444334.3 3 - 4 965 68
NM_175387.3 NP_780596.1 3 - 4 965 68
GenBank mRNA AF229055.1 - 2 - 3 450 68
AF387322.1 - 2 - 3 251 68
AK044929.1 - 2 - 3 482 68
AK077594.1 - 3 - 4 841 68
AK139555.1 - 4 - 5 935 68
AY659951.1 - 2 - 3 251 68
AY659952.1 - 2 - 3 251 68
AY904025.1 - 4 - 5 401 68
BC002124.1 - 2 - 3 345 3494630 68
BC027263.1 - 3 - 4 517 3661748 68
DQ017388.1 - 2 - 3 251 68

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500001799.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbfox2

Panther Classification:

Molecular Function -

RNA metabolism protein RNA processing factor RNA splicing factor nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
RNA splicing
regulation of definitive erythrocyte differentiation
radial glia guided migration of Purkinje cell
intracellular estrogen receptor signaling pathway
regulation of RNA splicing
negative regulation of transcription, DNA-templated
dendrite morphogenesis
neuromuscular process controlling balance
nucleotide binding
nucleic acid binding
transcription corepressor activity
RNA binding
mRNA binding
protein binding
transcription factor binding
poly(A) RNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001110827.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001110828.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001110829.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001110830.2 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001286417.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_001286419.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_053104.6 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_175387.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 NM_175387.3 Refseq
Affymetrix Mouse Clariom S Array PSR1500013998.mm.1 TC1500001799.mm.1 MTA TC

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