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See other SMPD4 GE Assays ›
Gene Symbol:
Smpd4
Gene Name:
sphingomyelin phosphodiesterase 4
Gene Aliases:
4122402O22Rik, mKIAA1418
Chromosome Location:
Chr.16: 17619354 - 17644830 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm01171191_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smpd4
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001164609.1 NP_001158081.1 1 - 2 83 66
NM_001164610.1 NP_001158082.1 1 - 2 83 66
NM_001164611.1 NP_001158083.1 1 - 2 83 66
NM_029945.3 NP_084221.2 1 - 2 83 66
GenBank mRNA AK019466.2 - 1 - 2 84 66
AK031029.1 - 1 - 2 77 66
AK031685.1 - 1 - 2 82 66
AK035892.1 - 1 - 2 75 66
AK036055.1 - 1 - 2 75 66
AK036380.1 - 1 - 2 79 66
AK129354.1 - 1 - 2 60 66
AK138720.1 - 1 - 2 57 66
AK142394.1 - 1 - 2 74 66
AK164234.1 - 1 - 2 75 66
AK164456.1 - 1 - 2 57 66
BC026767.1 - 1 - 2 56 5137008 66

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More Information


Additional Information:

This assay is in the 5'UTR region of the AK031029.1, AK031685.1, AK035892.1, AK164234.1, AK164456.1, BC026767.1, NM_001164609.1, NM_001164610.1, NM_001164611.1, NM_029945.3 transcripts.

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Mus musculus 1700 Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smpd4

Panther Classification:

Molecular Function -

hydrolase phosphodiesterase metabolite interconversion enzyme

Gene Ontology Categories:

Function(s) Process(es)

sphingomyelin catabolic process
glycerophospholipid catabolic process
ceramide biosynthetic process
cellular response to tumor necrosis factor
sphingomyelin phosphodiesterase activity
hydrolase activity
metal ion binding
sphingomyelin phosphodiesterase D activity

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164609.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164609.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164610.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164610.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164611.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_001164611.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_029945.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 NM_029945.3 Refseq
Affymetrix Mouse Clariom S Array PSR1600001913.mm.1 TC1600000221.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164609.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164609.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164610.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164610.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164611.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_001164611.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_029945.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 NM_029945.3 Refseq
Affymetrix Mouse Clariom S Array PSR1600001909.mm.1 TC1600000221.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 918657 - -

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