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See other RNF20 GE Assays ›
Gene Symbol:
Rnf20
Gene Name:
ring finger protein 20
Gene Aliases:
4833430L21Rik, AW540162, C79397, mKIAA4116
Chromosome Location:
Chr.4: 49632011 - 49656886 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00812904_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rnf20
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001163263.1 NP_001156735.1 3 - 4 777 75
NM_182999.2 NP_892044.1 4 - 5 624 75
GenBank mRNA AK048862.1 - 3 - 4 736 75
AK051278.1 - 3 - 4 736 75
AK053783.1 - 4 - 5 612 75
AK082529.1 - 3 - 4 681 75
AK085436.1 - 3 - 4 755 75
AK087860.1 - 3 - 4 703 75
AK220492.1 - 3 - 4 693 75
BC052482.1 - 4 - 5 563 6308280 75

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000555.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rnf20

Gene Ontology Categories:

Function(s) Process(es)

protein polyubiquitination
regulation of transcription, DNA-templated
ubiquitin-dependent protein catabolic process
histone monoubiquitination
chromatin modification
histone ubiquitination
negative regulation of cell migration
positive regulation of histone methylation
histone H2B ubiquitination
positive regulation of transcription, DNA-templated
negative regulation of mRNA polyadenylation
positive regulation of histone H2B ubiquitination
p53 binding
chromatin binding
transcription coactivator activity
mRNA 3'-UTR binding
ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
ubiquitin protein ligase binding
histone binding
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0400004063.mm.1 NM_001163263.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004063.mm.1 NM_001163263.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004063.mm.1 NM_182999.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004063.mm.1 NM_182999.2 Refseq
Affymetrix Mouse Clariom S Array PSR0400004063.mm.1 TC0400000555.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0400004064.mm.1 NM_001163263.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004064.mm.1 NM_001163263.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004064.mm.1 NM_182999.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400004064.mm.1 NM_182999.2 Refseq
Affymetrix Mouse Clariom S Array PSR0400004064.mm.1 TC0400000555.mm.1 MTA TC

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