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Gene Symbol:
Thra
Gene Name:
thyroid hormone receptor alpha
Gene Aliases:
6430529J03Rik, AW259572, Erba, Nr1a1, Rvr, T3R[a], T3Ralpha, Thra1, Thra2
Chromosome Location:
Chr.11: 98741873 - 98765111 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00579691_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Thra
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_178060.3 NP_835161.1 3 - 4 556 63
GenBank mRNA AK078233.1 - 3 - 4 556 63
BC046795.1 - 528 5717946 63
X07750.1 - 2 - 3 126 63
X07751.1 - 126 63
X07752.1 - 126 63
X51983.1 - 2 - 3 130 63

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100001580.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Nuclear Receptor Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Thra

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor DNA-binding transcription factor zinc finger transcription factor gene-specific transcriptional regulator

Gene Ontology Categories:

Function(s) Process(es)

cartilage condensation
ossification
regulation of thyroid hormone mediated signaling pathway
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
learning or memory
regulation of heart contraction
female courtship behavior
response to cold
hormone-mediated signaling pathway
organ morphogenesis
positive regulation of myotube differentiation
negative regulation of RNA polymerase II transcriptional preinitiation complex assembly
erythrocyte differentiation
intracellular receptor signaling pathway
thyroid gland development
regulation of myeloid cell apoptotic process
cytoplasmic sequestering of transcription factor
steroid hormone mediated signaling pathway
negative regulation of sequence-specific DNA binding transcription factor activity
negative regulation of transcription, DNA-templated
positive regulation of female receptivity
positive regulation of transcription from RNA polymerase II promoter
regulation of lipid catabolic process
Type I pneumocyte differentiation
negative regulation of DNA-templated transcription, initiation
steroid receptor RNA activator RNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
steroid hormone receptor activity
single-stranded RNA binding
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
thyroid hormone receptor activity
protein binding
transcription factor binding
zinc ion binding
TBP-class protein binding
protein domain specific binding
chromatin DNA binding
protein complex binding
protein homodimerization activity
sequence-specific DNA binding
transcription regulatory region DNA binding
intronic transcription regulatory region DNA binding
metal ion binding
protein heterodimerization activity
protein dimerization activity
thyroid hormone binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1100014693.mm.1 NM_178060.4 Refseq
Affymetrix Mouse Clariom S Array PSR1100014693.mm.1 TC1100001580.mm.1 MTA TC

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