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See other SSC5D GE Assays ›
Gene Symbol:
Ssc5d
Gene Name:
scavenger receptor cysteine rich family, 5 domains
Gene Aliases:
A430110N23Rik, S5D-SRCRB
Chromosome Location:
Chr.7: 4925130 - 4944828 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00557116_g1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ssc5d
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_173008.2 NP_766596.1 2 - 3 164 74
GenBank mRNA AK079906.1 - 2 - 3 165 74
AK165666.1 - 2 - 3 226 74
BC141044.1 - 2 - 3 162 9055656 74
EU850434.1 - 2 - 3 165 74

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000050.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ssc5d

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)

immune system process
receptor-mediated endocytosis
defense response
multicellular organism development
detection of bacterial lipoprotein
innate immune response
defense response to Gram-negative bacterium
defense response to Gram-positive bacterium
regulation of interleukin-8 secretion
negative regulation of interleukin-8 secretion
fibronectin binding
scavenger receptor activity
protein binding
laminin binding
extracellular matrix binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0700000603.mm.1 NM_173008.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700000603.mm.1 NM_173008.2 Refseq
Affymetrix Mouse Clariom S Array PSR0700000603.mm.1 TC0700000050.mm.1 MTA TC

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