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See other SEMA6D GE Assays ›
Gene Symbol:
Sema6d
Gene Name:
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
Gene Aliases:
1110067B02Rik, AA409156, D330011G23, mKIAA1479
Chromosome Location:
Chr.2: 124089969 - 124667789 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00553144_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sema6d
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001290997.1 NP_001277926.1 7 - 8 922 101
NM_001291000.1 NP_001277929.1 3 - 4 1040 101
NM_172537.4 NP_766125.2 3 - 4 1040 101
NM_199238.3 NP_954708.1 3 - 4 1040 101
NM_199239.3 NP_954709.1 2 - 3 275 101
NM_199240.3 NP_954710.1 2 - 3 275 101
NM_199241.3 NP_954711.1 2 - 3 275 101
GenBank mRNA AB091532.1 - 3 - 4 1040 101
AB091533.1 - 2 - 3 221 101
AB091534.1 - 2 - 3 221 101
AB091535.1 - 2 - 3 221 101
AB091536.1 - 2 - 3 221 101
AK031307.1 - 3 - 4 736 101
AK052232.1 - 3 - 4 448 101
AK084922.1 - 3 - 4 737 101
AK122515.1 - 7 - 8 925 101
BC060680.1 - 3 - 4 334 6406252 101

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200001866.mm.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sema6d

Panther Classification:

Molecular Function -

membrane-bound signaling molecule intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)

multicellular organism development
nervous system development
positive regulation of smooth muscle cell migration
negative regulation of smooth muscle cell migration
ventricular system development
cell differentiation
protein binding
semaphorin receptor binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 NM_172537.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 NM_199238.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 NM_199239.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 NM_199240.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 NM_199241.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014547.mm.1 TC0200001866.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 NM_172537.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 NM_199238.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 NM_199239.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 NM_199240.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 NM_199241.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014545.mm.1 TC0200001866.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 NM_172537.4 Refseq
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 NM_199238.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 NM_199239.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 NM_199240.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 NM_199241.3 Refseq
Affymetrix Mouse Clariom S Array PSR0200014546.mm.1 TC0200001866.mm.1 MTA TC

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